RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BEND2Q8NDZ0 799 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM230Q96A57 120 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 OTOFQ9HC10 1997 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 MS4A18H0YCH9 400 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 J3QT63 122 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 FZD5Q13467 585 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 MS4A18Q3C1V0 323 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 OR4D9Q8NGE8 314 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 KLK13Q9UKR3 277 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 TRIP12Q14669 1992 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 PLAC9Q5JTB6 97 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 ZCCHC14Q8WYQ9 949 aaKnown RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 GABRG3Q99928 467 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 SPRY1O43609 319 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 LINC00614P0C842 121 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 DEFB103AP81534 67 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 C10orf113Q5VZT2 155 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 LPAR5Q9H1C0 372 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 PAM16Q9Y3D7 125 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 SYNGR1O43759 233 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 NXPH3O95157 252 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 BGLAPP02818 100 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 TRGC2P03986 189 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 HOXA5P20719 270 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 PLP1P60201 277 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 IBA57Q5T440 356 aaKnown RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 OLIG3Q7RTU3 272 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 GAPTQ8N292 157 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 RND3P61587 244 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 KISS1RQ969F8 398 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-204ENST00000375290 SERGEFQ9UGK8 458 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 NEURL1O76050 574 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 PAPPA-AS1Q5QFB9 102 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 PLSCR2Q9NRY7 297 aa8.93□□□□□ -0.98
PTCH1-204ENST00000375290 MOGAT1Q96PD6 335 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 FLRT3Q9NZU0 649 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF256Q9Y2P7 627 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-204ENST00000375290 TNFSF11O14788 317 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 PIAS2O75928 621 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 SCGB1D4Q6XE38 83 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 C1RLQ9NZP8 487 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 NPY1RP25929 384 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 HYAL1Q12794 435 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 CYR61O00622 381 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 NDUFB3O43676 98 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 ANKRD10Q9NXR5 420 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 NUDT3O95989 172 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 COX5BP10606 129 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 STARD6P59095 220 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 VASH2Q86V25 355 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 RPL30P62888 115 aaKnown RBP8.92□□□□□ -0.98
PTCH1-204ENST00000375290 C11orf42Q8N5U0 333 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM252Q8N6L7 170 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 GVQW1Q8N7I0 195 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 FGF12P61328 243 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 OR10AD1Q8NGE0 317 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 PKIBQ9C010 78 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 IL17BQ9UHF5 180 aa8.92□□□□□ -0.98
PTCH1-204ENST00000375290 FCGR3AP08637 254 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 RPL7P18124 248 aaKnown RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SAPCD1Q5SSQ6 148 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF645Q8N7E2 425 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 OR2M3Q8NG83 312 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 OR51B6Q9H340 312 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 TCF24Q7RTU0 167 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SPEM1Q8N4L4 309 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 APCDD1LQ8NCL9 501 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SDHCQ99643 169 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 PRSS27Q9BQR3 290 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 RBKSQ9H477 322 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 PRSS1P07477 247 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 FAM234AQ9H0X4 552 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 CLDN16Q9Y5I7 305 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 CA2P00918 260 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF32P17041 273 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 PSG5Q15238 335 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 UBALD2Q8IYN6 164 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 THOC3Q96J01 351 aaKnown RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 CXCL16Q9H2A7 254 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 CISD3P0C7P0 127 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 FAM157CP0CG43 387 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 DCAF16Q9NXF7 216 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 F5P12259 2224 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 PRRG2O14669 202 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SRFP11831 508 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 MC5RP33032 325 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 TWIST1Q15672 202 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 H1FXQ92522 213 aaKnown RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SPSB4Q96A44 273 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 NRSN2Q9GZP1 204 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 OR2W5A6NFC9 320 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 GTF3AQ92664 365 aaKnown RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 TWSG1Q9GZX9 223 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms