RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PDGFBP01127 241 aaPredicted RBP17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 GNRHRP30968 328 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 NMSQ5H8A3 153 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 LYG1Q8N1E2 194 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 REPIN1Q9BWE0 567 aaKnown RBP17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 K7EP13 123 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 SPRY1O43609 319 aaPredicted RBP17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 PPYP01298 95 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 OR5G3P0C626 314 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 SPIN3Q5JUX0 258 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 KCNIP4Q6PIL6 250 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 MRPL30Q8TCC3 161 aaKnown RBP17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 WDYHV1Q96HA8 205 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 HSPB9Q9BQS6 159 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 PLK3Q9H4B4 646 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 RAC1P63000 192 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 Q6ZVH6 145 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 LHX4Q969G2 390 aa17.68■□□□□ 0.42
TMEFF1-201ENST00000374879 HMGB3O15347 200 aaKnown RBP17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 OR2J2O76002 312 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 Q6ZPA2 131 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 ZNF295-AS1Q8N0V1 137 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 ORAOV1Q8WV07 137 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 TECTBQ96PL2 329 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 TP53TG3Q9ULZ0 132 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 PIGLQ9Y2B2 252 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 BLACEA4D250 179 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 C2orf72A6NCS6 295 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 LCN2P80188 198 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 MYPOPQ86VE0 399 aaPredicted RBP17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 ADPRHL1Q8NDY3 354 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 MRPL13Q9BYD1 178 aaKnown RBP17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 TAAR3PQ9P1P4 343 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 KLHL13Q9P2N7 655 aa17.67■□□□□ 0.42
TMEFF1-201ENST00000374879 A0A1W2PNV4 684 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 A0A1W2PQD3 144 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 CLEC18AA5D8T8 446 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 TSPAN2O60636 221 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 ADMP35318 185 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 TPPP2P59282 170 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 CARD17Q5XLA6 110 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 TCF23Q7RTU1 214 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 CLEC18CQ8NCF0 446 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 GATAD1Q8WUU5 269 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 PATZ1Q9HBE1 687 aaKnown RBP17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 CD207Q9UJ71 328 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 VDAC3Q9Y277 283 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 PTRH2Q9Y3E5 179 aaKnown RBP17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 COMPP49747 757 aaPredicted RBP17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 CLRN1P58418 232 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 PDCD1Q15116 288 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 KIAA0895LQ68EN5 471 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 ALKBH7Q9BT30 221 aaPredicted RBP17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 LRRC61Q9BV99 259 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 MMP17Q9ULZ9 603 aa17.66■□□□□ 0.42
TMEFF1-201ENST00000374879 LINC00310P59036 64 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 PLCXD2Q0VAA5 305 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 OR4F5Q8NH21 305 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 OR4F4Q96R69 305 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 ZPBPQ9BS86 351 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 SLC39A9Q9NUM3 307 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 LOC105371242A0A075B767 164 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 DUXBA0A1W2PPF3 345 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 A8MXE2 369 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 VDAC1P21796 283 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 MLF1P58340 268 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 ARL16Q0P5N6 197 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 RBM24Q9BX46 236 aaKnown RBP17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 ZNF160Q9HCG1 818 aa17.65■□□□□ 0.42
TMEFF1-201ENST00000374879 TMEM250H0YL14 139 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 DHRS3O75911 302 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 PAFAH1B2P68402 229 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 EIF3IQ13347 325 aaKnown RBP17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 UBE2V1Q13404 147 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 ATP6V1FQ16864 119 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 PIGYQ3MUY2 71 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 DOCK11Q5JSL3 2073 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 NPIPB13A6NJU9 1138 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 NPIPB4C9JG80 1138 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 F5H5K5 113 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 ZNF709Q8N972 641 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 PSMG3Q9BT73 122 aaPredicted RBP17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 SLC7A10Q9NS82 523 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 SOHLH2Q9NX45 425 aa17.64■□□□□ 0.41
TMEFF1-201ENST00000374879 H3BML4 177 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 IGLV3-1P01715 115 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 CAPZBP47756 277 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 PSMB3P49720 205 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 BLKP51451 505 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 RPS18P62269 152 aaKnown RBP17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 ZNF818PQ6ZRF7 136 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 ZNF721Q8TF20 911 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 PP6455Q8WZ26 134 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 WWTR1Q9GZV5 400 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 GSX1Q9H4S2 264 aaPredicted RBP17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 C10orf142B7Z368 130 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 IGKV1D-33P01593 117 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 IGKV1-33P01594 117 aa17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 ACSF3Q4G176 576 aaPredicted RBP17.63■□□□□ 0.41
TMEFF1-201ENST00000374879 TMEM144Q7Z5S9 345 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms