RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RPL36AP83881 106 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 PDZK1IP1Q13113 114 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 IL15RAQ13261 267 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ATXN7L3Q14CW9 347 aaPredicted RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 RSU1Q15404 277 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SLC9A3R2Q15599 337 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 LPAL2Q16609 132 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ANKRD55Q3KP44 614 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 LRRC37A5PQ49AS3 106 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PAN3Q58A45 887 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 PABPC1L2AQ5JQF8 200 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 DCAF10Q5QP82 559 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 TSPO2Q5TGU0 170 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 C6orf201Q7Z4U5 140 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 LURAP1LQ8IV03 231 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 CCDC36Q8IYA8 594 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZDHHC23Q8IYP9 409 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SAXO1Q8IYX7 474 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 OSR2Q8N2R0 312 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 STPG2Q8N412 459 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 POC1AQ8NBT0 407 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SLC30A7Q8NEW0 376 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FGFBP3Q8TAT2 258 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ABHD3Q8WU67 409 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 DCUN1D4Q92564 292 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PIK3IP1Q96FE7 263 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 CYYR1Q96J86 154 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 C2orf50Q96LR7 162 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FER1L6-AS2Q96M78 137 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZNF75AQ96N20 296 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 LINC00052Q96N35 136 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 RNF126Q9BV68 326 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ST6GALNAC5Q9BVH7 336 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZNF471Q9BX82 626 aaPredicted RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 ARRDC1-AS1Q9H2J1 176 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 ZNF701Q9NV72 531 aaPredicted RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 NECAP2Q9NVZ3 263 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PLEKHJ1Q9NW61 149 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 C1orf123Q9NWV4 160 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 KIAA1456Q9P272 454 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 IL36RNQ9UBH0 155 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 PEMTQ9UBM1 199 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 FBXL17Q9UF56 701 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SLC7A11Q9UPY5 501 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 NOSIPQ9Y314 301 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 CSAG2Q9Y5P2 127 aa4.05□□□□□ -1.76
USP48-202ENST00000374730 SETXQ7Z333 2677 aaKnown RBP4.05□□□□□ -1.76
USP48-202ENST00000374730 SHANK1Q9Y566 2161 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 IGKV1-12A0A0C4DH73 117 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 C13orf42A0A1B0GVH6 325 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 A0A1W2PNU3 283 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 FAM230AA0A1W2PPH8 454 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RAB19A4D1S5 217 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ZNF587BE7ETH6 402 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 SDCBPO00560 298 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 ANGPTL7O43827 346 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 NME2P1O60361 137 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 PDCD6O75340 191 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ADAP1O75689 374 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ACTL6AO96019 429 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 CST4P01036 141 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 IGKV1D-12P01611 117 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 HOXD4P09016 255 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 PATE4P0C8F1 98 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 OR5H8P0DN80 308 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 PGAM2P15259 253 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 TMEM11P17152 192 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 GLRA1P23415 457 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RBMXP38159 391 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 RBM11P57052 281 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 EIF5AP63241 154 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 ZNF92Q03936 586 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RBM39Q14498 530 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 RNPS1Q15287 305 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 OR1C1Q15619 314 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 TAF9Q16594 264 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 PLCXD3Q63HM9 321 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 ELP2Q6IA86 826 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 TMEM211Q6ICI0 200 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 SPINK14Q6IE38 97 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 UQCC3Q6UW78 93 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 DHRS11Q6UWP2 260 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 Q6ZS49 121 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 DPPA2Q7Z7J5 298 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 SGPP2Q8IWX5 399 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 TMEM251Q8N6I4 163 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 LRTM2Q8N967 370 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RELL2Q8NC24 303 aaPredicted RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 MDS2Q8NDY4 140 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 OR10AD1Q8NGE0 317 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 MAFIPQ8WZ33 124 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 RRNAD1Q96FB5 475 aaKnown RBP4.04□□□□□ -1.76
USP48-202ENST00000374730 GALNT14Q96FL9 552 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 OR10C1Q96KK4 312 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 SIGLEC12Q96PQ1 595 aa4.04□□□□□ -1.76
USP48-202ENST00000374730 CMSS1Q9BQ75 279 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms