RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
TRAF1-201ENST00000373887 SYNGR2O43760 224 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 TMEM255AQ5JRV8 349 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PMELP40967 661 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 NAAAQ02083 359 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PRSS8Q16651 343 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 GBGT1Q8N5D6 347 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 SAP30LQ9HAJ7 183 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 IGHV3OR16-12A0A075B7B8 117 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 CD99P14209 185 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 BRS3P32247 399 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 GFRA1P56159 465 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 RSPO4Q2I0M5 234 aaPredicted RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 SLC25A45Q8N413 288 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PERPQ96FX8 193 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 IL20Q9NYY1 176 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 SCN3AQ9NY46 2000 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 TRAV38-1A0A0B4J264 116 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 RAC3P60763 192 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PSG6Q00889 435 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 MSRB3Q8IXL7 192 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 RSG1Q9BU20 258 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 IGKV3D-11A0A0A0MRZ8 115 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 COX6B1P14854 86 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 LIFP15018 202 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 P2RY1P47900 373 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 CLEC18BQ6UXF7 455 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 WDR34Q96EX3 536 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 VSTM2LQ96N03 204 aa12.54□□□□□ -0.4
TRAF1-201ENST00000373887 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 EXOGQ9Y2C4 368 aaKnown RBP12.54□□□□□ -0.4
TRAF1-201ENST00000373887 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 KCNMB2Q9Y691 235 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 ANKRD20A5PA0PJZ0 165 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 KHDC3LQ587J8 217 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 P2RX4Q99571 388 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 CDC42EP2O14613 210 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 SOCS1O15524 211 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 REG1BP48304 166 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 SLC35B1P78383 322 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 NTMQ9P121 344 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 RPS4Y2Q8TD47 263 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
TRAF1-201ENST00000373887 CCL28Q9NRJ3 127 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
TRAF1-201ENST00000373887 ROM1Q03395 351 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
TRAF1-201ENST00000373887 CGB1A6NKQ9 187 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 ISLRO14498 428 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 TMEM127O75204 238 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 EMP1P54849 157 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 STARD6P59095 220 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 VAX2Q9UIW0 290 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 HIST1H1EP10412 219 aaKnown RBP12.52□□□□□ -0.4
TRAF1-201ENST00000373887 PNRC1Q12796 327 aaPredicted RBP12.52□□□□□ -0.4
TRAF1-201ENST00000373887 NEURL2Q9BR09 285 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 RTN4RQ9BZR6 473 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 RAB33BQ9H082 229 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 PLAC1Q9HBJ0 212 aa12.52□□□□□ -0.4
TRAF1-201ENST00000373887 DIRC3C9JPN6 131 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 PPP1CCP36873 323 aaKnown RBP12.52□□□□□ -0.41
TRAF1-201ENST00000373887 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 SKP2Q13309 424 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 COL5A1-AS1Q5SY13 56 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 MRGPRFQ96AM1 343 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 SLC25A33Q9BSK2 321 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 C9orf172C9J069 976 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 CDIPTO14735 213 aa12.52□□□□□ -0.41
TRAF1-201ENST00000373887 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
TRAF1-201ENST00000373887 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.41
TRAF1-201ENST00000373887 CD74P04233 296 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 C16orf97H3BN30 126 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 M0QZK8 103 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 FOXS1O43638 330 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 GGCTO75223 188 aaKnown RBP12.51□□□□□ -0.41
TRAF1-201ENST00000373887 UCNP55089 124 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 MRPL24Q96A35 216 aaKnown RBP12.51□□□□□ -0.41
TRAF1-201ENST00000373887 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
TRAF1-201ENST00000373887 HARBI1Q96MB7 349 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 NUDT3O95989 172 aa12.51□□□□□ -0.41
TRAF1-201ENST00000373887 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms