RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DYNLT3P51808 116 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 GUK1Q16774 197 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 ZNF826PQ6ZT77 177 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 TMEM178AQ8NBL3 297 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 PKIBQ9C010 78 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 LYRM2Q9NU23 88 aaPredicted RBP20.17■□□□□ 0.82
CDK9-201ENST00000373264 ZFP57Q9NU63 452 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 PSG7Q13046 419 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 TESK1Q15569 626 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 LUZP4Q9P127 313 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 OR14J1Q9UGF5 321 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 TINAGQ9UJW2 476 aa20.17■□□□□ 0.82
CDK9-201ENST00000373264 PRSS44E7EML9 344 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 H0Y980 276 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 WNT9BO14905 357 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 IGKV1-39P01597 117 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 IGKV1D-39P04432 117 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 PAX9P55771 341 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 ID3Q02535 119 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 VWA1Q6PCB0 445 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 ZNF295-AS1Q8N0V1 137 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 OR1J1Q8NGS3 322 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 GPR146Q96CH1 333 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 GMPPAQ96IJ6 420 aaPredicted RBP20.16■□□□□ 0.82
CDK9-201ENST00000373264 CDH20Q9HBT6 801 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 H7C2Y5 167 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 CTXN2P0C2S0 81 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 UBE2NP61088 152 aaKnown RBP20.16■□□□□ 0.82
CDK9-201ENST00000373264 OR10Z1Q8NGY1 313 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 RARRES2Q99969 163 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 RTL8AQ9BWD3 113 aa20.16■□□□□ 0.82
CDK9-201ENST00000373264 DAOP14920 347 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 VAMP2P63027 116 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 ZFP82Q8N141 532 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 OR5D13Q8NGL4 314 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 OR2G3Q8NGZ4 309 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 RXFP4Q8TDU9 374 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 CLCF1Q9UBD9 225 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 RNF115Q9Y4L5 304 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 ZNF16P17020 682 aaPredicted RBP20.15■□□□□ 0.82
CDK9-201ENST00000373264 ERVK11-1P61568 191 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 LINC00596Q86U02 117 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 RIMS4Q9H426 269 aaPredicted RBP20.15■□□□□ 0.82
CDK9-201ENST00000373264 PLEKHF2Q9H8W4 249 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 NDRG3Q9UGV2 375 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 TRAPPC2LQ9UL33 140 aa20.15■□□□□ 0.82
CDK9-201ENST00000373264 TRBV6-6A0A0A6YYG2 114 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 K7N7A8 449 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 NXPH2O95156 264 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 INTS1Q8N201 2190 aaKnown RBP20.14■□□□□ 0.82
CDK9-201ENST00000373264 GTF3AQ92664 365 aaKnown RBP20.14■□□□□ 0.82
CDK9-201ENST00000373264 SPIN2AQ99865 258 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 SPIN2BQ9BPZ2 258 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 AIFM2Q9BRQ8 373 aa20.14■□□□□ 0.82
CDK9-201ENST00000373264 FOXF2Q12947 444 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 GABRA6Q16445 453 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 OR10V1Q8NGI7 309 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 CABLES2Q9BTV7 478 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 PARD6AQ9NPB6 346 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 MLXQ9UH92 298 aa20.14■□□□□ 0.81
CDK9-201ENST00000373264 SMG1Q96Q15 3661 aaKnown RBP20.13■□□□□ 0.81
CDK9-201ENST00000373264 PSPNO60542 156 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 LMO1P25800 156 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 UCP2P55851 309 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 TMEM267Q0VDI3 215 aaPredicted RBP20.13■□□□□ 0.81
CDK9-201ENST00000373264 ZNF497Q6ZNH5 498 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 C2CD4CQ8TF44 421 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 CLCC1Q96S66 551 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 ZNF175Q9Y473 711 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 LRP5LA4QPB2 252 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 CLEC18AA5D8T8 446 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 WRBO00258 174 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 HSPA12AO43301 675 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 PITX3O75364 302 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 CRYBA1P05813 215 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 CLEC18CQ8NCF0 446 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 KCNS2Q9ULS6 477 aa20.13■□□□□ 0.81
CDK9-201ENST00000373264 SERPINE2P07093 398 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 C9orf106Q8NAJ2 232 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 KLF14Q8TD94 323 aaPredicted RBP20.12■□□□□ 0.81
CDK9-201ENST00000373264 MLNRO43193 412 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 WDR1O75083 606 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 OR13C7P0DN81 318 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 FAM214BQ7L5A3 538 aa20.12■□□□□ 0.81
CDK9-201ENST00000373264 RBM7Q9Y580 266 aaKnown RBP20.12■□□□□ 0.81
CDK9-201ENST00000373264 KIAA1324LA8MWY0 1029 aaPredicted RBP20.11■□□□□ 0.81
CDK9-201ENST00000373264 CNOT4O95628 575 aaKnown RBP20.11■□□□□ 0.81
CDK9-201ENST00000373264 SNRNP70P08621 437 aaKnown RBP20.11■□□□□ 0.81
CDK9-201ENST00000373264 PGA5P0DJD9 388 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 USF3Q68DE3 2245 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 PEA15Q15121 130 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 ISOC2Q96AB3 205 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 IFT22Q9H7X7 185 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 OBP2BQ9NPH6 170 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 RPS10P5Q9NQ39 176 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 CACNG5Q9UF02 275 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 RNF150Q9ULK6 438 aa20.11■□□□□ 0.81
CDK9-201ENST00000373264 COLCA2A8K830 154 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 IGKV1-5P01602 117 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 FTH1P19P0C7X4 201 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms