RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SLC52A3Q9NQ40 469 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 ZDHHC8Q9ULC8 765 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 OR5C1Q8NGR4 320 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 OR1N2Q8NGR9 330 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 ASB13Q8WXK3 278 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 FAM210BQ96KR6 192 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 GHITMQ9H3K2 345 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 GPR27Q9NS67 375 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 J3QT63 122 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 M0R2Z0 102 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 NDUFB6O95139 128 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 PPOXP50336 477 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SCAND1P57086 179 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 FAM78BQ5VT40 261 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SSX8Q7RTT4 187 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SIRT7Q9NRC8 400 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 ATG2BQ96BY7 2078 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 A0A1W2PR77 199 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 C9orf170A2RU37 121 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 NPIPB8E9PQR5 432 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 FCN1O00602 326 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 OGG1O15527 345 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 ADAM11O75078 769 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CTSBP07858 339 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 SLC35B1P78383 322 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PIGYQ3MUY2 71 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 DUSP18Q8NEJ0 188 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 WDR13Q9H1Z4 485 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 MTFP1Q9UDX5 166 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PRSS50Q9UI38 385 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PPIAL4EA0A075B759 164 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PPIAL4DF5H284 164 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PGA3P0DJD8 388 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PPIAL4FP0DN26 164 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF658BQ4V348 819 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 C11orf87Q6NUJ2 197 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 C11orf44Q8N8P7 122 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 ZBTB44Q8NCP5 570 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CISD1Q9NZ45 108 aaKnown RBP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 PPIAL4AQ9Y536 164 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 HS3ST3B1Q9Y662 390 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 SOCS1O15524 211 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 NGFRP08138 427 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 SFTA3P0C7M3 94 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 LPAR5Q9H1C0 372 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 RASL12Q9NYN1 266 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CIDEAO60543 219 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 REG1AP05451 166 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 VSIG10L2P0DP72 767 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CTSSP25774 331 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 ZP4Q12836 540 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 ADIPOQQ15848 244 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 SLC25A53Q5H9E4 307 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 Q6ZN92 141 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 BAP18Q8IXM2 172 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 OR10G4Q8NGN3 311 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 OR10G9Q8NGN4 311 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 OR10G7Q8NGN6 311 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 GPR137Q96N19 417 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 DMRTA2Q96SC8 542 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 DLX1P56177 255 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 C10orf111Q8N326 155 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CBY1Q9Y3M2 126 aa8.53□□□□□ -1.04
COL4A6-202ENST00000372216 CD37P11049 281 aa8.52□□□□□ -1.04
COL4A6-202ENST00000372216 FAM122BQ7Z309 247 aa8.52□□□□□ -1.04
COL4A6-202ENST00000372216 ZPLD1Q8TCW7 415 aa8.52□□□□□ -1.04
COL4A6-202ENST00000372216 RNF133Q8WVZ7 376 aa8.52□□□□□ -1.04
COL4A6-202ENST00000372216 RAB40CQ96S21 281 aa8.52□□□□□ -1.04
COL4A6-202ENST00000372216 LOC285556D6RIA3 1793 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 IGHV3-35A0A0C4DH35 117 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 SS18L1O75177 396 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-202ENST00000372216 MELTFP08582 738 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 INPP5JQ15735 1006 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-202ENST00000372216 NSUN5P1Q3KNT7 163 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 C10orf113Q5VZT2 155 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 HCP5Q6MZN7 132 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 SLC26A10Q8NG04 563 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 TECRQ9NZ01 308 aaKnown RBP8.52□□□□□ -1.05
COL4A6-202ENST00000372216 UCP2P55851 309 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 PRB3Q04118 309 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-202ENST00000372216 CEBPEQ15744 281 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF502Q8TBZ5 544 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 TRBV5-3A0A0A0MS03 114 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 KLRB1Q12918 225 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 HERPUD1Q15011 391 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 PSG4Q00888 419 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 GABRA6Q16445 453 aa8.52□□□□□ -1.05
COL4A6-202ENST00000372216 LINC00596Q86U02 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms