RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SRIP30626 198 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 ROM1Q03395 351 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 MGAT2Q10469 447 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 RFLNAQ6ZTI6 216 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 IGKV6D-21A0A0A0MT36 114 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 FMODQ06828 376 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 SMOC1Q9H4F8 434 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 TYMSP04818 313 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 OR2Z1Q8NG97 314 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 RBKSQ9H477 322 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 TNFRSF12AQ9NP84 129 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 VSIG4Q9Y279 399 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 SRSF4Q08170 494 aaKnown RBP13.49□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF660Q6AZW8 331 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF788Q6ZQV5 615 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 OR4X1Q8NH49 305 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 C14orf144Q96I85 54 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 ZDHHC8Q9ULC8 765 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 LILRA3Q8N6C8 439 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-201ENST00000371817 C7orf66A4D0T2 115 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF707Q96C28 371 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-201ENST00000371817 FGF17O60258 216 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 RTL10Q7L3V2 364 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 KIR3DL2P43630 455 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 CLLU1OSQ5K130 101 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 RGS7BPQ6MZT1 257 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-201ENST00000371817 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-201ENST00000371817 ABCA4P78363 2273 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 RPS19BP1Q86WX3 136 aaKnown RBP13.48□□□□□ -0.25
COL5A1-201ENST00000371817 MORN4Q8NDC4 146 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 FRG2CA6NGY1 282 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 PPYP01298 95 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 GALNSP34059 522 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 MAS1LP35410 378 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 PDCD1Q15116 288 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 ZFAND6Q6FIF0 208 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 MOB4Q9Y3A3 225 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 LAMB2P55268 1798 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 TWSG1Q9GZX9 223 aa13.48□□□□□ -0.25
COL5A1-201ENST00000371817 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF665Q9H7R5 613 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 POU2F2P09086 479 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 ALKBH3Q96Q83 286 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-201ENST00000371817 PPIL1Q9Y3C6 166 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 LINC00587B1AMM8 73 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 TMEM50BP56557 158 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 PAXXQ9BUH6 204 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 NKX2-6A6NCS4 301 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 LYZL2Q7Z4W2 148 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 LGALS7P47929 136 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 TNFRSF9Q07011 255 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF79Q15937 498 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 ACER2Q5QJU3 275 aa13.47□□□□□ -0.25
COL5A1-201ENST00000371817 HTN1P15515 57 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 GCSAMLQ5JQS6 135 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 TCF24Q7RTU0 167 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 LURAP1LQ8IV03 231 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-201ENST00000371817 NDUFB3O43676 98 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 SSBP4Q9BWG4 385 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-201ENST00000371817 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 A0A1B0GX12 115 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 NHLRC3Q5JS37 347 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 GAPTQ8N292 157 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 TMSB15BA0A087X1C1 80 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 UBE2L6O14933 153 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 ETHE1O95571 254 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 B4GALNT1Q00973 533 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 NKG7Q16617 165 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 ASB1Q9Y576 335 aa13.46□□□□□ -0.25
COL5A1-201ENST00000371817 IDSB3KWA1 339 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 ALKBH6Q3KRA9 238 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 OR1K1Q8NGR3 316 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 WNT2BQ93097 391 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 TMEM45BQ96B21 275 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.26
COL5A1-201ENST00000371817 LRP10Q7Z4F1 713 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 CXorf67Q86X51 503 aaPredicted RBP13.46□□□□□ -0.26
COL5A1-201ENST00000371817 SDK2Q58EX2 2172 aa13.46□□□□□ -0.26
COL5A1-201ENST00000371817 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 GRIFINA4D1Z8 144 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 LDLRAD4O15165 306 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 FAM53AQ6NSI3 398 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-201ENST00000371817 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 SFTPA1Q8IWL2 248 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 PRELID3AQ96N28 172 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 IGLV3-10A0A075B6K4 115 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
COL5A1-201ENST00000371817 OR2V1Q8NHB1 315 aa13.45□□□□□ -0.26
COL5A1-201ENST00000371817 WNT10AQ9GZT5 417 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms