RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 C17orf51A8MQB3 221 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 M0R135 149 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 SLC17A3O00476 420 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 SYNGR2O43760 224 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 RHBDL1O75783 438 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 IGHV3-9P01782 118 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 SUPT4H1P63272 117 aaKnown RBP10.27□□□□□ -0.77
PTPN1-201ENST00000371621 OR8B12Q8NGG6 310 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 TMEM170AQ8WVE7 144 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF799Q96GE5 643 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 OR2A5Q96R48 311 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 TRAV39A0A0B4J263 110 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 PRRT4C9JH25 899 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 G3V3Y1 287 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 PITX3O75364 302 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 PPYP01298 95 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 RPS4Y1P22090 263 aaKnown RBP10.27□□□□□ -0.77
PTPN1-201ENST00000371621 SRIP30626 198 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF117Q03924 483 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 AARDQ4LEZ3 155 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 BOD1Q96IK1 185 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF385AQ96PM9 386 aaKnown RBP10.27□□□□□ -0.77
PTPN1-201ENST00000371621 ZBP1Q9H171 429 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 DHRS13Q6UX07 377 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 Q6ZNB5 142 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 OR6C1Q96RD1 312 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 SLC7A10Q9NS82 523 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 K7N7A8 449 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 ISLRO14498 428 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 ITGB1BP1O14713 200 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 HGFACQ04756 655 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 TMEM215Q68D42 235 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 TRAT1Q6PIZ9 186 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 CLN8Q9UBY8 286 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 IGKV1-8A0A0C4DH67 115 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 NPIPB7O75200 414 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 IGKV1D-16P01601 117 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 IL3RAP26951 378 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 AESQ08117 197 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 FUT7Q11130 342 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 PIGYQ3MUY2 71 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 TDRG1Q3Y452 100 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 OSR2Q8N2R0 312 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 FGF11Q92914 225 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
PTPN1-201ENST00000371621 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
PTPN1-201ENST00000371621 PHF3Q92576 2039 aaKnown RBP10.26□□□□□ -0.77
PTPN1-201ENST00000371621 TRBV24-1A0A075B6N3 115 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 A0A1W2PPV9 198 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 KBTBD11O94819 623 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 VAMP5O95183 116 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 RPL23P62829 140 aaKnown RBP10.25□□□□□ -0.77
PTPN1-201ENST00000371621 NHLH1Q02575 133 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 FXYD3Q14802 87 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 RPEL1Q2QD12 228 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 C16orf47Q6ZP98 133 aaPredicted RBP10.25□□□□□ -0.77
PTPN1-201ENST00000371621 DGAT2L6Q6ZPD8 337 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 MRGPRFQ96AM1 343 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 RAB40CQ96S21 281 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 PTRH2Q9Y3E5 179 aaKnown RBP10.25□□□□□ -0.77
PTPN1-201ENST00000371621 CRYM-AS1A6NIL9 109 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 MRPL21Q7Z2W9 205 aaKnown RBP10.25□□□□□ -0.77
PTPN1-201ENST00000371621 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.25□□□□□ -0.77
PTPN1-201ENST00000371621 STPG4Q8N801 248 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 GJC3Q8NFK1 279 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 RNF133Q8WVZ7 376 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 RTN4RQ9BZR6 473 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 PCED1AQ9H1Q7 454 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 LYRM4Q9HD34 91 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 CCL25O15444 150 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 TSPAN7P41732 249 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 C1orf100Q5SVJ3 147 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 ZNF841Q6ZN19 808 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 CA13Q8N1Q1 262 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 DERL1Q9BUN8 251 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
PTPN1-201ENST00000371621 PIGBOS1A0A0B4J2F0 54 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 C1QTNF9BB2RNN3 333 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 PPIAL4DF5H284 164 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 DEFA4P12838 97 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 CA6P23280 308 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 PLPPR5Q32ZL2 321 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 MOB1BQ7L9L4 216 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 C1QL2Q7Z5L3 287 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 OR1L3Q8NH93 324 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 RALYQ9UKM9 306 aaKnown RBP10.24□□□□□ -0.77
PTPN1-201ENST00000371621 NYNRINQ9P2P1 1898 aaKnown RBP10.24□□□□□ -0.77
PTPN1-201ENST00000371621 CEBPBP17676 345 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 ADMP35318 185 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 HLA-BQ31612 363 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 PRR31Q5SQ13 230 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 RTL10Q7L3V2 364 aa10.24□□□□□ -0.77
PTPN1-201ENST00000371621 LINC00615Q96LM1 132 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms