RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 RIMS4Q9H426 269 aaPredicted RBP14.56□□□□□ -0.08
VPS37B-202ENST00000371248 RPUSD1Q9UJJ7 312 aaKnown RBP14.56□□□□□ -0.08
VPS37B-202ENST00000371248 FLNAP21333 2647 aaKnown RBP14.55□□□□□ -0.08
VPS37B-202ENST00000371248 CREBBPQ92793 2442 aa14.55□□□□□ -0.08
VPS37B-202ENST00000371248 MEIS3P1A6NDR6 274 aa14.55□□□□□ -0.08
VPS37B-202ENST00000371248 CYSRT1A8MQ03 144 aa14.55□□□□□ -0.08
VPS37B-202ENST00000371248 MEF2CQ06413 473 aaPredicted RBP14.55□□□□□ -0.08
VPS37B-202ENST00000371248 RNASE12Q5GAN4 147 aaKnown RBP14.55□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF782Q6ZMW2 699 aaPredicted RBP14.55□□□□□ -0.08
VPS37B-202ENST00000371248 Q6ZPA2 131 aa14.55□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF230Q9UIE0 474 aaPredicted RBP14.55□□□□□ -0.08
VPS37B-202ENST00000371248 TEX15Q9BXT5 2789 aa14.55□□□□□ -0.08
VPS37B-202ENST00000371248 TRBV23-1A0A0A0MS06 115 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 A0A1W2PQ09 198 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 hADV38S2A0JD32 116 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 TSPAN4O14817 238 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 RCC1P18754 421 aaPredicted RBP14.54□□□□□ -0.08
VPS37B-202ENST00000371248 RFX2P48378 723 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF79Q15937 498 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 TMEM200BQ69YZ2 307 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 TRAPPC6BQ86SZ2 158 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 OR13A1Q8NGR1 328 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 MRGPRDQ8TDS7 321 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 NCOR1P1Q9H4R4 102 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 PPIAL4CA0A0B4J2A2 164 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF98A6NK75 572 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 I3L521 148 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 SMAD7O15105 426 aaKnown RBP14.54□□□□□ -0.08
VPS37B-202ENST00000371248 SLC22A5O76082 557 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 PPIAL4GP0DN37 164 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 GLP1RP43220 463 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 PYDC2Q56P42 97 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF565Q8N9K5 539 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 MAFIPQ8WZ33 124 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 OR6C3Q9NZP0 311 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 OTOGQ6ZRI0 2925 aa14.54□□□□□ -0.08
VPS37B-202ENST00000371248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS37B-202ENST00000371248 TRGV10A0A0A0MS01 117 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 FCGR3AP08637 254 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 PTBP1P26599 531 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS37B-202ENST00000371248 ZNF273Q14593 569 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 TMEM249Q2WGJ8 235 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 TCF23Q7RTU1 214 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 C8orf46Q8TAG6 207 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 GPX8Q8TED1 209 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 C1orf159Q96HA4 380 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 ST6GALNAC5Q9BVH7 336 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 LPAR3Q9UBY5 353 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 LINC00312Q9Y6C7 94 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 ZANQ9Y493 2812 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 TRBV6-6A0A0A6YYG2 114 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 B4DSR2 109 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 CTDSPLO15194 276 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 FCER2P06734 321 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 DGCR2P98153 550 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 LAMTOR1Q6IAA8 161 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 GVQW1Q8N7I0 195 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 LY6G5BQ8NDX9 201 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 OR52I2Q8NH67 350 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 FCAMRQ8WWV6 532 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 OCSTAMPQ9BR26 566 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 Q9N2K0 584 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 MMP26Q9NRE1 261 aa14.53□□□□□ -0.08
VPS37B-202ENST00000371248 MBNL3Q9NUK0 354 aaKnown RBP14.53□□□□□ -0.08
VPS37B-202ENST00000371248 POLR3KQ9Y2Y1 108 aaPredicted RBP14.53□□□□□ -0.08
VPS37B-202ENST00000371248 GABARAPH6UMI1 98 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 SULT1C2O00338 296 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 LPLP06858 475 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 BTF3P20290 206 aaKnown RBP14.52□□□□□ -0.09
VPS37B-202ENST00000371248 DTYMKP23919 212 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 MRPS10P82664 201 aaKnown RBP14.52□□□□□ -0.09
VPS37B-202ENST00000371248 PAX2Q02962 417 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 ZNF880Q6PDB4 577 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 C5orf24Q7Z6I8 188 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 LINC01356Q8N9X3 169 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 CORO2AQ92828 525 aa14.52□□□□□ -0.09
VPS37B-202ENST00000371248 UBE2J1Q9Y385 318 aaPredicted RBP14.52□□□□□ -0.09
VPS37B-202ENST00000371248 LIPFP07098 398 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 MSMBP08118 114 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 CCL3L1P16619 93 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 GZMHP20718 246 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 SRRQ9GZT4 340 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 IFT46Q9NQC8 304 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 KCNIP1Q9NZI2 227 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 KLK11Q9UBX7 282 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 IGHV2-70DA0A0C4DH43 119 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 ENSAO43768 121 aaKnown RBP14.51□□□□□ -0.09
VPS37B-202ENST00000371248 IGHV4-31P0DP07 118 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 SSTR5P35346 364 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 CR1LQ2VPA4 569 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 MOB1BQ7L9L4 216 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 Q8N402 240 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 PRR18Q8N4B5 295 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 UBALD1Q8TB05 177 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 SMIM4Q8WVI0 70 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 MSI2Q96DH6 328 aaKnown RBP14.51□□□□□ -0.09
VPS37B-202ENST00000371248 ZNF714Q96N38 554 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 TAF9BQ9HBM6 251 aa14.51□□□□□ -0.09
VPS37B-202ENST00000371248 ABCA1O95477 2261 aa14.5□□□□□ -0.09
VPS37B-202ENST00000371248 KIR2DS1A0A191URI9 304 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms