RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ST6GALNAC2Q9UJ37 374 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 TRIP11Q15643 1979 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 CXorf1O96002 111 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 OR1L8Q8NGR8 309 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 CLDN14O95500 239 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 IGHV4-34P06331 123 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 IER3P46695 156 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 SPRED2Q7Z698 418 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 WIPI2Q9Y4P8 454 aa19.31■□□□□ 0.68
TM9SF3-201ENST00000371142 PDE6DO43924 150 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 PLPPR5Q32ZL2 321 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 LGALSLQ3ZCW2 172 aaPredicted RBP19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 RFLNBQ8N5W9 214 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 ZNF519Q8TB69 540 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 POM121Q96HA1 1249 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 HERVK_113P61574 105 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 LDLRAD3Q86YD5 345 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 SNRPCP09234 159 aaKnown RBP19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 AREGP15514 252 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 C16orf82Q7Z2V1 217 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 OR8A1Q8NGG7 326 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 CD82P27701 267 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 CCL8P80075 99 aa19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 EAF1Q96JC9 268 aaPredicted RBP19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 OPN3Q9H1Y3 402 aaPredicted RBP19.3■□□□□ 0.68
TM9SF3-201ENST00000371142 PPIAL4EA0A075B759 164 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PPIAL4DF5H284 164 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 SMPD2O60906 423 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PPIAL4FP0DN26 164 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PRDX2P32119 198 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 P2RX4Q99571 388 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PPIAL4AQ9Y536 164 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 KIR3DL2P43630 455 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 RBM11P57052 281 aaKnown RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 NANOS3P60323 173 aaKnown RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 RPL31P62899 125 aaKnown RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PRNTQ86SH4 94 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 LRRC3BQ96PB8 259 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 GPX7Q96SL4 187 aaPredicted RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 HSF4Q9ULV5 492 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PLA2G10O15496 165 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 IRF3Q14653 427 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 ISXQ2M1V0 245 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 TEX30Q5JUR7 227 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 SNRNP40Q96DI7 357 aaKnown RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 MFSD2BA6NFX1 497 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 H3BQ15 152 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 PACRGQ96M98 296 aaPredicted RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 ELOA3CA0A087WX78 387 aaPredicted RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 DPPA3Q6W0C5 159 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 ZNF107Q9UII5 783 aaPredicted RBP19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 AUP1Q9Y679 476 aa19.29■□□□□ 0.68
TM9SF3-201ENST00000371142 C1orf185Q5T7R7 199 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 LYRM7Q5U5X0 104 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 SMCHD1A6NHR9 2005 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 C7orf77A4D0Y5 90 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 MOSPD3O75425 235 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 APCSP02743 223 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 RCC1P18754 421 aaPredicted RBP19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 HOGA1Q86XE5 327 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 A0A0J9YW62 118 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 CLPPQ16740 277 aaPredicted RBP19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 ZBTB34Q8NCN2 500 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 CCL13Q99616 98 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 SNURFLB1AK76 121 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 MEOX2P50222 304 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 ZNF841Q6ZN19 808 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 STARD4Q96DR4 205 aa19.28■□□□□ 0.68
TM9SF3-201ENST00000371142 HIST1H1EP10412 219 aaKnown RBP19.27■□□□□ 0.68
TM9SF3-201ENST00000371142 CDS2O95674 445 aa19.27■□□□□ 0.68
TM9SF3-201ENST00000371142 MRGPRGQ86SM5 289 aa19.27■□□□□ 0.68
TM9SF3-201ENST00000371142 MMP16P51512 607 aa19.27■□□□□ 0.68
TM9SF3-201ENST00000371142 KCNMB1Q16558 191 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 TRAF4Q9BUZ4 470 aaPredicted RBP19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 HILPDAQ9Y5L2 63 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 B4DEV8 164 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 PTP4A3O75365 173 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 TCTAP57738 103 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 PSG4Q00888 419 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF79Q15937 498 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 NFAM1Q8NET5 270 aaPredicted RBP19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 HIGD1AQ9Y241 93 aa19.27■□□□□ 0.67
TM9SF3-201ENST00000371142 FCGR3AP08637 254 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 ADRA2AP08913 450 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 OR5AU1Q8NGC0 362 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 TMEM171Q8WVE6 324 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 ZNF501Q96CX3 271 aaPredicted RBP19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 TRBV23-1A0A0A0MS06 115 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 GBGT1Q8N5D6 347 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 SIRT4Q9Y6E7 314 aaPredicted RBP19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 LOC389332A0A1B0GUA5 103 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 PGA4P0DJD7 388 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 PGA5P0DJD9 388 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 ATP6V0CP27449 155 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 RNFT1Q5M7Z0 435 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 DEDDO75618 318 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 GZMMP51124 257 aa19.26■□□□□ 0.67
TM9SF3-201ENST00000371142 CORTO00230 105 aa19.25■□□□□ 0.67
TM9SF3-201ENST00000371142 PAFAH1B2P68402 229 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms