RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LAMTOR1Q6IAA8 161 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 NUFIP2Q7Z417 695 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 FLVCR1-AS1Q8TAF5 88 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 ZNF519Q8TB69 540 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 USB1Q9BQ65 265 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 TLNRD1Q9H1K6 362 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 OPN3Q9H1Y3 402 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 TNFRSF19Q9NS68 423 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 FOXJ2Q9P0K8 574 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 NCBP2LA6PVI3 153 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 WISP1O95388 367 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 SP1P08047 785 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 PRB4P10163 310 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 RPS2P15880 293 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 CHRNB4P30926 498 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 SUCLG1P53597 346 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 ROM1Q03395 351 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 HMGN3Q15651 99 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 CEBPEQ15744 281 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 FAM201AQ5SY85 155 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 FAM27BQ5VT28 67 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 M1APQ8TC57 530 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 MISP3Q96FF7 219 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 IP6K3Q96PC2 410 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 GPR87Q9BY21 358 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 C5orf66Q9H5L9 145 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 LRRK1Q38SD2 2015 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 ACTL6AO96019 429 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 HPP00738 406 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 CRYBA1P05813 215 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 MUC1P15941 1255 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 EWSR1Q01844 656 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 PUSL1Q8N0Z8 303 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 EDARADDQ8WWZ3 215 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 GPX7Q96SL4 187 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 MMP26Q9NRE1 261 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 TNFSF18Q9UNG2 199 aa7.88□□□□□ -1.15
SMARCA1-202ENST00000371122 LAMA1P25391 3075 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 DENND4CQ5VZ89 1909 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 TOX3O15405 576 aaPredicted RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 LY86O95711 162 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 HSPB1P04792 205 aaKnown RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ORM2P19652 201 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 UBE2G1P62253 170 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 H3F3AP84243 136 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 PCOLCEQ15113 449 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 C15orf54Q8N8G6 183 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ZPBPQ9BS86 351 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 IL36GQ9NZH8 169 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 LPAR3Q9UBY5 353 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 LNP1A1A4G5 178 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 C5orf63A6NC05 138 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 HAND1O96004 215 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 EGR1P18146 543 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 VDAC1P21796 283 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 FOXG1P55316 489 aaPredicted RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ERVFC1-1P60608 527 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 MPPED2Q15777 294 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 SLC25A47Q6Q0C1 308 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 UNQ9370/PRO34162Q6UXP9 181 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 VKORC1L1Q8N0U8 176 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 COMMD1Q8N668 190 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 SLC35B3Q9H1N7 401 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 OR51I2Q9H344 312 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ZDHHC11Q9H8X9 412 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 PILRBQ9UKJ0 227 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 THADAQ6YHU6 1953 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 WNT9BO14905 357 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 OPRK1P41145 380 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 CD200P41217 278 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 TIGITQ495A1 244 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 FBXW9Q5XUX1 488 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 TMEM65Q6PI78 240 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 HOGA1Q86XE5 327 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 BORCS7Q96B45 105 aa7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 ZNF552Q9H707 407 aaPredicted RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 RYDENQ9NUL5 291 aaKnown RBP7.87□□□□□ -1.15
SMARCA1-202ENST00000371122 MYO9AB2RTY4 2548 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 TRDCB7Z8K6 153 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 F6UZH7 168 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 G3V3Q6 166 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 ZNF737O75373 536 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 PLAUP00749 431 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 RBP4P02753 201 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 CST2P09228 141 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 SPP1P10451 314 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 COX6A1P12074 109 aa7.86□□□□□ -1.15
SMARCA1-202ENST00000371122 CAMPP49913 170 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms