RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LEAP2Q969E1 77 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 SLC25A46Q96AG3 418 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 PHF21AQ96BD5 680 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CMSS1Q9BQ75 279 aaKnown RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 RIMS4Q9H426 269 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 GNG12Q9UBI6 72 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 A0A087X0M5 115 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 A0A1B0GX30 115 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 C15orf65H3BRN8 121 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 NAPSAO96009 420 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 IGHV3-7P01780 117 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 HBZP02008 142 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 GNB3P16520 340 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 TMEM50BP56557 158 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CTF1Q16619 201 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 PLA1AQ53H76 456 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 ZNF554Q86TJ5 538 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 CLVS1Q8IUQ0 354 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 OR4P4Q8NGL7 312 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 OR9G1Q8NH87 305 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 MBNL3Q9NUK0 354 aaKnown RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 ABRACLQ9P1F3 81 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-204ENST00000370496 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
COL9A1-204ENST00000370496 IGHV3-43A0A0B4J1X8 118 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 SERPINE3A8MV23 424 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 CLDN34H7C241 214 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 RAB27BO00194 218 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 F2RL2O00254 374 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 MFNGO00587 321 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 IGHV3-43DP0DP04 118 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 HTR1DP28221 377 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 PRRX1P54821 245 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 ACTG1P63261 375 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 ARL6IP1Q15041 203 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 LRRC75BQ2VPJ9 315 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 KRTAP24-1Q3LI83 254 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 OLFML2AQ68BL7 652 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 OR5H6Q8NGV6 325 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 ZFAND2BQ8WV99 257 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 MMP28Q9H239 520 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 DCSTAMPQ9H295 470 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 POMT1Q9Y6A1 747 aa12.04□□□□□ -0.48
COL9A1-204ENST00000370496 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
COL9A1-204ENST00000370496 PAX6P26367 422 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 CEACAM3P40198 252 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 HLA-DRB3P79483 266 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 ARFRP1Q13795 201 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 HMGN3Q15651 99 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 SSX2Q16385 188 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 UBE2NLQ5JXB2 153 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 UTF1Q5T230 341 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 OR52M1Q8NGK5 317 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 OR10X1Q8NGY0 326 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 IL1F10Q8WWZ1 152 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 CREB3L1Q96BA8 519 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 MALSU1Q96EH3 234 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 ABCB10Q9NRK6 738 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 GFOD1Q9NXC2 390 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 MGAT4AQ9UM21 535 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 SPATA2Q9UM82 520 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 PSG11Q9UQ72 335 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 HILPDAQ9Y5L2 63 aa12.03□□□□□ -0.48
COL9A1-204ENST00000370496 ATRQ13535 2644 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 TRBV6-6A0A0A6YYG2 114 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 LEUTXA8MZ59 168 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 H3BUX3 64 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 J3QR06 171 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 IGLV1-47P01700 117 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 TALDO1P37837 337 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 IER3P46695 156 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 ARHGDIBP52566 201 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-204ENST00000370496 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 OR5R1Q8NH85 324 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 GALMQ96C23 342 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
COL9A1-204ENST00000370496 AJUBAQ96IF1 538 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 C19orf24Q9BVV8 132 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 CHIAQ9BZP6 476 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 OR2S2Q9NQN1 319 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 DPM3Q9P2X0 92 aa12.02□□□□□ -0.49
COL9A1-204ENST00000370496 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms