RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 A0A0G2JRQ6 117 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 C20orf202A1L168 122 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 KIAA1324LA8MWY0 1029 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-203ENST00000369259 M0R135 149 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 ITGB1BP1O14713 200 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 MSR1P21757 451 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 CHRNA7P36544 502 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 GUCA1AP43080 201 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-203ENST00000369259 FBXW4P57775 412 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 C1orf61Q13536 156 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 BORCS8Q96FH0 119 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 ZNF799Q96GE5 643 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 DEFB118Q96PH6 123 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 OR51B6Q9H340 312 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 TMEM9BQ9NQ34 198 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 A0A1W2PQF6 199 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 ZNF814B7Z6K7 855 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 TMEM144Q7Z5S9 345 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 YAF2Q8IY57 180 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
CHD1L-203ENST00000369259 GPR146Q96CH1 333 aa13.87□□□□□ -0.19
CHD1L-203ENST00000369259 WDR61Q9GZS3 305 aaKnown RBP13.87□□□□□ -0.19
CHD1L-203ENST00000369259 KIAA2026Q5HYC2 2103 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SLC22A20A6NK97 555 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 H0Y980 276 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
CHD1L-203ENST00000369259 OTX1P32242 354 aaPredicted RBP13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SOX8P57073 446 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 PPP1CBP62140 327 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SELENOTP62341 195 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 HBG1P69891 147 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 HBG2P69892 147 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SNAI3Q3KNW1 292 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 C16orf47Q6ZP98 133 aaPredicted RBP13.86□□□□□ -0.19
CHD1L-203ENST00000369259 LHFPL2Q6ZUX7 228 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SLC22A18ASQ8N1D0 253 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 OXGR1Q96P68 337 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 PLA2G2FQ9BZM2 168 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1D-13A0A0B4J2D9 117 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 B4DGG1 531 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1-13P0DP09 117 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 SLC25A6P12236 298 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 TDGF1P13385 188 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 LEMD1Q68G75 181 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 PARD6GQ9BYG4 376 aaPredicted RBP13.86□□□□□ -0.19
CHD1L-203ENST00000369259 CCL28Q9NRJ3 127 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 PSENENQ9NZ42 101 aa13.86□□□□□ -0.19
CHD1L-203ENST00000369259 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1D-33P01593 117 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 IGKV1-33P01594 117 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 HOXB2P14652 356 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 TNFRSF4P43489 277 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
CHD1L-203ENST00000369259 HAPLN4Q86UW8 402 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 VN1R17PQ8TDU5 208 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 TLX3O43711 291 aaPredicted RBP13.85□□□□□ -0.19
CHD1L-203ENST00000369259 EPHA8P29322 1005 aaPredicted RBP13.85□□□□□ -0.19
CHD1L-203ENST00000369259 TFF2Q03403 129 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 EXTL1Q92935 676 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 CIB3Q96Q77 187 aaPredicted RBP13.85□□□□□ -0.19
CHD1L-203ENST00000369259 OR4C12Q96R67 309 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 IL36GQ9NZH8 169 aa13.85□□□□□ -0.19
CHD1L-203ENST00000369259 RP1P56715 2156 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 RTTNQ86VV8 2226 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
CHD1L-203ENST00000369259 IAPPP10997 89 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 CD99P14209 185 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 ADMP35318 185 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 CDKN1AP38936 164 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 CAPZBP47756 277 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 CLDN17P56750 224 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 Q6ZS49 121 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 OR2AE1Q8NHA4 323 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 GATAD1Q8WUU5 269 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD1L-203ENST00000369259 SPTSSAQ969W0 71 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 NEIL1Q96FI4 390 aaPredicted RBP13.84□□□□□ -0.19
CHD1L-203ENST00000369259 HSPB9Q9BQS6 159 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 FBRSQ9HAH7 460 aa13.84□□□□□ -0.19
CHD1L-203ENST00000369259 IGHV5-51A0A0C4DH38 117 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 TRBV11-1A0A0K0K1C0 115 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.19
CHD1L-203ENST00000369259 CCL25O15444 150 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 MLNRO43193 412 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 SYNGR2O43760 224 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 PGLYRP1O75594 196 aaPredicted RBP13.83□□□□□ -0.19
CHD1L-203ENST00000369259 CDKN1BP46527 198 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 PTTG1IPP53801 180 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 RBM11P57052 281 aaKnown RBP13.83□□□□□ -0.19
CHD1L-203ENST00000369259 FOXL1Q12952 345 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 SHBQ15464 509 aa13.83□□□□□ -0.19
CHD1L-203ENST00000369259 MKI67P46013 3256 aaKnown RBP13.83□□□□□ -0.2
CHD1L-203ENST00000369259 GRIFINA4D1Z8 144 aa13.83□□□□□ -0.2
CHD1L-203ENST00000369259 OR7C1O76099 320 aaPredicted RBP13.83□□□□□ -0.2
CHD1L-203ENST00000369259 ESDP10768 282 aa13.83□□□□□ -0.2
CHD1L-203ENST00000369259 DRD1P21728 446 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms