RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 HEPN1Q6WQI6 88 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 Q6YL49 198 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 C6orf201Q7Z4U5 140 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZDHHC16Q969W1 377 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 TMEM133Q9H2Q1 129 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 RBM39Q14498 530 aaKnown RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 SLC9A3R2Q15599 337 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 OR4K15Q8NH41 348 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 UBALD1Q8TB05 177 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 JMJD8Q96S16 334 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 SDHCQ99643 169 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 TNFRSF19Q9NS68 423 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 FBLN5Q9UBX5 448 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 LINC00854A0A1B0GVQ3 168 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 FOXI3A8MTJ6 420 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 UPK1BO75841 260 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 ARG1P05089 322 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 BLVRBP30043 206 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 VEGFCP49767 419 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 MIDNQ504T8 468 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 UBE2NLQ5JXB2 153 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNF626Q68DY1 528 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 GAPTQ8N292 157 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 FAM89BQ8N5H3 189 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNF565Q8N9K5 539 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 OR11H6Q8NGC7 330 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 KIRREL1Q96J84 757 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 NEDD4LQ96PU5 975 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 FAAP24Q9BTP7 215 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 SRRQ9GZT4 340 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNF286AQ9HBT8 521 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 FAM96BQ9Y3D0 163 aa12.25□□□□□ -0.45
SMPDL3A-201ENST00000368440 IGHV4-59P01825 116 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 GLAP06280 429 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 TMEM50BP56557 158 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 LTC4SQ16873 150 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 LDLRAD3Q86YD5 345 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 DYNAPQ8N1N2 210 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 SLC25A38Q96DW6 304 aa12.24□□□□□ -0.45
SMPDL3A-201ENST00000368440 A0A1B0GVG6 124 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 NPIPB11E5RHQ5 1161 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 C15orf65H3BRN8 121 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 FBP1P09467 338 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 NFYBP25208 207 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 BAK1Q16611 211 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 MOGAT2Q3SYC2 334 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 STEAP3Q658P3 488 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 C5orf24Q7Z6I8 188 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 MRPL30Q8TCC3 161 aaKnown RBP12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 LEAP2Q969E1 77 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 C19orf24Q9BVV8 132 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 CLEC7AQ9BXN2 247 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 LINC00574Q9H8X3 128 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 PALMDQ9NP74 551 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 IDI2-AS1Q9NZ38 188 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 IGHV3-7P01780 117 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 APOA1P02647 267 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 Q6ZPA2 131 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 LYSMD2Q8IV50 215 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 ABHD12Q8N2K0 398 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 RAB22AQ9UL26 194 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 TRAPPC2LQ9UL33 140 aa12.23□□□□□ -0.45
SMPDL3A-201ENST00000368440 C12orf77C9JDV5 145 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 IER3P46695 156 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 LGALS4P56470 323 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 OLFML2AQ68BL7 652 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 OR52W1Q6IF63 320 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 Q8N402 240 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 PLEKHJ1Q9NW61 149 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 RHBDL2Q9NX52 303 aa12.22□□□□□ -0.45
SMPDL3A-201ENST00000368440 A0A087X0M5 115 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 A0A1B0GX30 115 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 H3BUI4 141 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 CA11O75493 328 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 IL7P13232 177 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 CD34P28906 385 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 RGS21Q2M5E4 152 aa12.21□□□□□ -0.45
SMPDL3A-201ENST00000368440 BEND2Q8NDZ0 799 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms