RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SLC2A8Q9NY64 477 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 LOC107986453A0A1B0GWG9 222 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 C15orf65H3BRN8 121 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 ARPC2O15144 300 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 RPP14O95059 124 aaKnown RBP11.01□□□□□ -0.65
VAMP4-202ENST00000367740 APOL3O95236 402 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 ATF1P18846 271 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 PRKACBP22694 351 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 HDXQ7Z353 690 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF439Q8NDP4 499 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 OR2K2Q8NGT1 345 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 PHLDA1Q8WV24 401 aaPredicted RBP11.01□□□□□ -0.65
VAMP4-202ENST00000367740 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 CNN2Q99439 309 aaKnown RBP11.01□□□□□ -0.65
VAMP4-202ENST00000367740 FAM118AQ9NWS6 357 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 CNOT2Q9NZN8 540 aaKnown RBP11.01□□□□□ -0.65
VAMP4-202ENST00000367740 SLC23A1Q9UHI7 598 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 ERGIC3Q9Y282 383 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 NUBP2Q9Y5Y2 271 aa11.01□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF785A8K8V0 405 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 NDUFA3O95167 84 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 NDUFB8O95169 186 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
VAMP4-202ENST00000367740 FASP25445 335 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 ACTR3P61158 418 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 ACTBL2Q562R1 376 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 CD200R1LQ6Q8B3 271 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 UTS2BQ765I0 119 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 SAXO1Q8IYX7 474 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 OR10G2Q8NGC3 310 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 CNIH3Q8TBE1 160 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 SPSB1Q96BD6 273 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 SLA2Q9H6Q3 261 aa11□□□□□ -0.65
VAMP4-202ENST00000367740 SAMHD1Q9Y3Z3 626 aaKnown RBP11□□□□□ -0.65
VAMP4-202ENST00000367740 ANKRD34BA5PLL1 514 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 MSGN1A6NI15 193 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF134P52741 427 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 CX3CL1P78423 397 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 CDK5Q00535 292 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 Q3ZCU0 254 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF660Q6AZW8 331 aaPredicted RBP10.99□□□□□ -0.65
VAMP4-202ENST00000367740 SLC35F2Q8IXU6 374 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 NPBQ8NG41 125 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 ARL11Q969Q4 196 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 FEVQ99581 238 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 NEK6Q9HC98 313 aa10.99□□□□□ -0.65
VAMP4-202ENST00000367740 LANCL1O43813 399 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 TRGV3P03979 118 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 HMGN1P05114 100 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 KCNJ3P48549 501 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 DYRK1AQ13627 763 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 SSX6Q7RTT6 188 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 ABHD5Q8WTS1 349 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 NR1H4Q96RI1 486 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-202ENST00000367740 FAM103A1Q9BTL3 118 aaKnown RBP10.98□□□□□ -0.65
VAMP4-202ENST00000367740 ADI1Q9BV57 179 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 GGTLC1Q9BX51 225 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 GAB2Q9UQC2 676 aa10.98□□□□□ -0.65
VAMP4-202ENST00000367740 CSTBP04080 98 aaKnown RBP10.97□□□□□ -0.65
VAMP4-202ENST00000367740 HSD17B1P14061 328 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 GZMHP20718 246 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 ALDH3A2P51648 485 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 TMEM267Q0VDI3 215 aaPredicted RBP10.97□□□□□ -0.65
VAMP4-202ENST00000367740 AKIRIN2Q53H80 203 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 REEP1Q9H902 201 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 ADGRL4Q9HBW9 690 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 FGFR1OP2Q9NVK5 253 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF581Q9P0T4 197 aa10.97□□□□□ -0.65
VAMP4-202ENST00000367740 ZNF670-ZNF695F2Z2N8 137 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 J3QL48 77 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 MOGAT2Q3SYC2 334 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 TMEM236Q5W0B7 351 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 OR2T5Q6IEZ7 315 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 PPP1R27Q86WC6 154 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 OR2T29Q8NH02 315 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 FGGYQ96C11 551 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 RDH12Q96NR8 316 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 MRPL20Q9BYC9 149 aaKnown RBP10.96□□□□□ -0.65
VAMP4-202ENST00000367740 FBXL15Q9H469 300 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 RNF150Q9ULK6 438 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 DHDHQ9UQ10 334 aa10.96□□□□□ -0.65
VAMP4-202ENST00000367740 C13orf42A0A1B0GVH6 325 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 FCN1O00602 326 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 OR2A4O95047 310 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 TRBV12-3P01733 135 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 MT-ND2P03891 347 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 KRT8P05787 483 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 UBCP0CG48 685 aaKnown RBP10.95□□□□□ -0.66
VAMP4-202ENST00000367740 CD40LGP29965 261 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms