RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 TCF20Q9UGU0 1960 aaKnown RBP6.31□□□□□ -1.4
VTA1-202ENST00000367630 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 SP1P08047 785 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 KRTCAP3Q53RY4 240 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 FFAR4Q5NUL3 377 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 ATOH1Q92858 354 aaPredicted RBP6.31□□□□□ -1.4
VTA1-202ENST00000367630 WDR13Q9H1Z4 485 aa6.31□□□□□ -1.4
VTA1-202ENST00000367630 YTHDF2Q9Y5A9 579 aaKnown RBP6.31□□□□□ -1.4
VTA1-202ENST00000367630 AGRPO00253 132 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 BCL3P20749 454 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 AKR1C3P42330 323 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 HFEQ30201 348 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 ADAM5Q6NVV9 412 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 GAPTQ8N292 157 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 RBMXL3Q8N7X1 1067 aaKnown RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 DTD1Q8TEA8 209 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 TIMD4Q96H15 378 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 WNT5BQ9H1J7 359 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 A0A0J9YW62 118 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 UBE2V2Q15819 145 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 SMIM15Q7Z3B0 74 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 C1orf210Q8IVY1 113 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 DNASE2O00115 360 aaPredicted RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 OR5G3P0C626 314 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 CEACAM6P40199 344 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 OR5R1Q8NH85 324 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 TIMP4Q99727 224 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 IL19Q9UHD0 177 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 ERRFI1Q9UJM3 462 aaPredicted RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 CRYBA1P05813 215 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 DAOP14920 347 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 OR10J1P30954 320 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 RPS27P42677 84 aaKnown RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 NAXEQ8NCW5 288 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 REPIN1Q9BWE0 567 aaKnown RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 WDR61Q9GZS3 305 aaKnown RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 PEAR1Q5VY43 1037 aaPredicted RBP6.3□□□□□ -1.4
VTA1-202ENST00000367630 OR4D5Q8NGN0 318 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 SLX1AQ9BQ83 275 aa6.3□□□□□ -1.4
VTA1-202ENST00000367630 A0A1B0GW15 77 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 FAM24AA6NFZ4 105 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 PRR33A8MZF0 331 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 G3V3Q6 166 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 UBE2CO00762 179 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 PGLYRP1O75594 196 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 IGLV3-1P01715 115 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 MMP7P09237 267 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 CCL3P10147 92 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ERVS71-1P61550 626 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ZNF90Q03938 601 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 HAGHQ16775 308 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 SRD5A3Q9H8P0 318 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 SLC35D1Q9NTN3 355 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 SLC25A10Q9UBX3 287 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 SIRPB1O00241 398 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 NTN3O00634 580 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 RCC1P18754 421 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 LRRC75BQ2VPJ9 315 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 LRRC10Q5BKY1 277 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 DMRTA1Q5VZB9 504 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 TMEM217Q8N7C4 229 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 OR10X1Q8NGY0 326 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 COMMD5Q9GZQ3 224 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 SLC7A10Q9NS82 523 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 MYO10Q9HD67 2058 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 NKX2-6A6NCS4 301 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 AQP7O14520 342 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 CHST1O43916 411 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 UBE2G1P62253 170 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 TESK1Q15569 626 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 WIPI1Q5MNZ9 446 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 FAM71F2Q6NXP2 309 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 C1QTNF6Q9BXI9 259 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 GAB2Q9UQC2 676 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ZNF146Q15072 292 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 PQLC2Q6ZP29 291 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 CYP2G1PQ6ZSU1 146 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 BHLHA15Q7RTS1 189 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 R3HDM4Q96D70 268 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 ELOVL5Q9NYP7 299 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 IQCF6A8MYZ5 107 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 HS3ST1O14792 307 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 KBTBD11O94819 623 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 RPS2P15880 293 aaKnown RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 MC5RP33032 325 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 BMI1P35226 326 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 KLF3P57682 345 aaPredicted RBP6.29□□□□□ -1.4
VTA1-202ENST00000367630 SIGLECL1Q8N7X8 197 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 PERPQ96FX8 193 aa6.29□□□□□ -1.4
VTA1-202ENST00000367630 PRRG2O14669 202 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms