RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 OR10AC1Q8NH08 325 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PRSS50Q9UI38 385 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PGA4P0DJD7 388 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PGA5P0DJD9 388 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM106AQ4KMX7 169 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PTX4Q96A99 478 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 CCL19Q99731 98 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 METTL1Q9UBP6 276 aaKnown RBP13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
NUCKS1-201ENST00000367142 CDC42EP2O14613 210 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 PIGYQ3MUY2 71 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM74A3Q4VXF1 159 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 MRPL54Q6P161 138 aaKnown RBP13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FLRT3Q9NZU0 649 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 TMEM189A5PLL7 270 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 WDR25Q64LD2 544 aaPredicted RBP13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 DCTN5Q9BTE1 182 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 SLX4Q8IY92 1834 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FFAR1O14842 300 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 HMGA2P52926 109 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 TAS2R60P59551 318 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM214BQ7L5A3 538 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 LSMEM1Q8N8F7 131 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 A6NDN8 102 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 PDLIM4P50479 330 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 C1QL3Q5VWW1 255 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM24BQ8N5W8 94 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 RAB37Q96AX2 223 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 TIMP4Q99727 224 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 CHST5Q9GZS9 411 aa13.71□□□□□ -0.21
NUCKS1-201ENST00000367142 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 OR2D3Q8NGH3 330 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 SCNM1Q9BWG6 230 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 CTF1Q16619 201 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 DMKNQ6E0U4 476 aaPredicted RBP13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 DUX5Q96PT3 197 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 ZDHHC8Q9ULC8 765 aa13.71□□□□□ -0.22
NUCKS1-201ENST00000367142 MGST3O14880 152 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 PSG2P11465 335 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF137PP52743 207 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 ATP5J2P56134 94 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 SSX1Q16384 188 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 FRRS1LQ9P0K9 344 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 LEUTXA8MZ59 168 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 B4DEV8 164 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 ADAP1O75689 374 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 UCP2P55851 309 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF519Q8TB69 540 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 MRPL30Q8TCC3 161 aaKnown RBP13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 CTDSPLO15194 276 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 CTSSP25774 331 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 KLF9Q13886 244 aaPredicted RBP13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 NSUN5P2Q63ZY6 315 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 OGG1O15527 345 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 NDUFA2O43678 99 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 BVESQ8NE79 360 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 EID2BQ96D98 161 aa13.7□□□□□ -0.22
NUCKS1-201ENST00000367142 MSRB3Q8IXL7 192 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 RNF133Q8WVZ7 376 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 OR2V2Q96R30 315 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF107Q9UII5 783 aaPredicted RBP13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 TMEM56-RWDD3S4R434 201 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 OR4C46A6NHA9 309 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 PAGE4O60829 102 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 RPL29P47914 159 aaKnown RBP13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 NUBP1P53384 320 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 LDLRAD3Q86YD5 345 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 PGLYRP3Q96LB9 341 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 IGHV1-45A0A0A0MS14 117 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 EWSR1Q01844 656 aaKnown RBP eCLIP13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 GUCD1Q96NT3 240 aa13.69□□□□□ -0.22
NUCKS1-201ENST00000367142 A0A0B4J293 547 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 TMEM50BP56557 158 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 ZNF721Q8TF20 911 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 PRR13Q9NZ81 148 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 HMSDA8MTL9 139 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 ZFP30Q9Y2G7 519 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 CDS2O95674 445 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 ATP5G2Q06055 141 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 OR8D4Q8NGM9 314 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 IGKV3D-15A0A087WSY6 115 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 CEACAM18A8MTB9 384 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 SOSTQ9BQB4 213 aa13.68□□□□□ -0.22
NUCKS1-201ENST00000367142 RNF115Q9Y4L5 304 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms