RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 CD1BP29016 333 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 SRSF9Q13242 221 aaKnown RBP eCLIP13.72□□□□□ -0.21
FBXO28-201ENST00000366862 WDR74Q6RFH5 385 aaPredicted RBP13.72□□□□□ -0.21
FBXO28-201ENST00000366862 POC1AQ8NBT0 407 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 PRNDQ9UKY0 176 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 TNFRSF1AP19438 455 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 CTGFP29279 349 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 SSX8Q7RTT4 187 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 MOB3BQ86TA1 216 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
FBXO28-201ENST00000366862 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 TNFSF14O43557 240 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 C10orf113Q5VZT2 155 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 OR2Z1Q8NG97 314 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 GAL3ST2Q9H3Q3 398 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 PRRC2BQ5JSZ5 2229 aaKnown RBP13.72□□□□□ -0.21
FBXO28-201ENST00000366862 ORM1P02763 201 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 ZNF506Q5JVG8 444 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 ATRAIDQ6UW56 229 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 OR1K1Q8NGR3 316 aa13.72□□□□□ -0.21
FBXO28-201ENST00000366862 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
FBXO28-201ENST00000366862 A0A1W2PR80 420 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 ZP4Q12836 540 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 PMCHL2Q9BQD1 86 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 SCN4AP35499 1836 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 AMY1AP04745 511 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 LBX1P52954 281 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 RBM11P57052 281 aaKnown RBP13.71□□□□□ -0.21
FBXO28-201ENST00000366862 OR10S1Q8NGN2 331 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 GNRHR2Q96P88 292 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 C5orf66Q9H5L9 145 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 SIPA1L3O60292 1781 aaPredicted RBP13.71□□□□□ -0.21
FBXO28-201ENST00000366862 ID4P47928 161 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
FBXO28-201ENST00000366862 A0A087WWC5 75 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 M0R296 226 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 FOLR2P14207 255 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 SRD5A2P31213 254 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 SLC23A3Q6PIS1 610 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 KISS1RQ969F8 398 aaPredicted RBP13.71□□□□□ -0.22
FBXO28-201ENST00000366862 SPOCK3Q9BQ16 436 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 TTC3P53804 2025 aa13.71□□□□□ -0.22
FBXO28-201ENST00000366862 RNF224P0DH78 156 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 RAC3P60763 192 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 LYZP61626 148 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 TAF15Q92804 592 aaKnown RBP eCLIP13.7□□□□□ -0.22
FBXO28-201ENST00000366862 FOXJ2Q9P0K8 574 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 A0A0U1RQV5 110 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 NPY1RP25929 384 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 TCTAP57738 103 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 SLC35E4Q6ICL7 350 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 AP5S1Q9NUS5 200 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 SIT1Q9Y3P8 196 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 FOCADQ5VW36 1801 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 A8MWL6 223 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
FBXO28-201ENST00000366862 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
FBXO28-201ENST00000366862 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.7□□□□□ -0.22
FBXO28-201ENST00000366862 OR10D3Q8NH80 312 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 TMEM238LA0A1B0GVL6 79 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 A6NJY4 79 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 KBTBD11O94819 623 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 IBA57Q5T440 356 aaKnown RBP13.7□□□□□ -0.22
FBXO28-201ENST00000366862 OR8I2Q8N0Y5 310 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 OR5A2Q8NGI9 324 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 IGHV5-51A0A0C4DH38 117 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 H3BVH4 76 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 NPVFQ9HCQ7 196 aa13.7□□□□□ -0.22
FBXO28-201ENST00000366862 CENPVL1A0A0U1RR11 272 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 hADV38S2A0JD32 116 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 J3QT63 122 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 NMUP48645 174 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 CLDN18P56856 261 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 RNF122Q9H9V4 155 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 AHDC1Q5TGY3 1603 aaPredicted RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 GZMHP20718 246 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 ACP1P24666 158 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 COMPP49747 757 aaPredicted RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 SERGEFQ9UGK8 458 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 A0A1B0GV72 72 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 FBLL1A6NHQ2 334 aaKnown RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 GLULP15104 373 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 MYOGP15173 224 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 SH3BGRL3Q9H299 93 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 PARLQ9H300 379 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 NUP214P35658 2090 aaPredicted RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 SPRY3O43610 288 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
FBXO28-201ENST00000366862 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 CTAG1AP78358 180 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 ZDHHC8Q9ULC8 765 aa13.69□□□□□ -0.22
FBXO28-201ENST00000366862 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
FBXO28-201ENST00000366862 PATE4P0C8F1 98 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms