RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR51T1Q8NGJ9 327 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 DGCR14Q96DF8 476 aaKnown RBP6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 MBOAT4Q96T53 435 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 MROQ9BYG7 248 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 CHST5Q9GZS9 411 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 PTTG2Q9NZH5 202 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 RABL2AQ9UBK7 228 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 GLS2Q9UI32 602 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 MRM2Q9UI43 246 aaKnown RBP6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 MRPS28Q9Y2Q9 187 aaKnown RBP6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 R4GMQ9 66 aa6.4□□□□□ -1.38
HMGB1P39-201ENST00000366304 MEIKINA0A087WXM9 373 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 A0A0J9YWU9 116 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 SHISA3A0PJX4 238 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 FUOMA2VDF0 154 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 FAM25EA8MYX2 175 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 PRODHO43272 600 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 KDM4BO94953 1096 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 CSN3P07498 182 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 MAGEA2P43356 314 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF134P52741 427 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 PSME3P61289 254 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 BNIP1Q12981 228 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 APOFQ13790 326 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 KLF5Q13887 457 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 MLANAQ16655 118 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ECSCRQ19T08 205 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 LRRC36Q1X8D7 754 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 RSBN1Q5VWQ0 802 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR8H1Q8NGG4 311 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR5D18Q8NGL1 313 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ADAT3Q96EY9 351 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 BORCS8Q96FH0 119 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ELOVL1Q9BW60 279 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ANKRD60Q9BZ19 345 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 SIGLEC8Q9NYZ4 499 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 IKZF2Q9UKS7 526 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 PRELID1Q9Y255 219 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 ARL2BPQ9Y2Y0 163 aa6.39□□□□□ -1.39
HMGB1P39-201ENST00000366304 IGHV3-43A0A0B4J1X8 118 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 A0A1W2PN81 502 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF785A8K8V0 405 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 C15orf65H3BRN8 121 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 RGS13O14921 159 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 DEGS1O15121 323 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 KRT36O76013 467 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 HLA-DRB1P01911 266 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 IGHV3-43DP0DP04 118 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 CHRNA7P36544 502 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 RBP2P50120 134 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 RAB40BQ12829 278 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 GINS1Q14691 196 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF124Q15973 351 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 CNPY1Q3B7I2 92 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 TMEM236Q5W0B7 351 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 CD300LDQ6UXZ3 194 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 HACD2Q6Y1H2 254 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC16A12Q6ZSM3 486 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 SSX6Q7RTT6 188 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 GTSCR1Q86UQ5 136 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 RDH10Q8IZV5 341 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 PRSS35Q8N3Z0 413 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 LINC00311Q8N616 119 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF439Q8NDP4 499 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 GAB2Q9UQC2 676 aa6.38□□□□□ -1.39
HMGB1P39-201ENST00000366304 A0A1B0GVG6 124 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 H0Y980 276 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 H3BN98 237 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 FCN1O00602 326 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 ARPC2O15144 300 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 SYT7O43581 403 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 DCTN3O75935 186 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 RPP14O95059 124 aaKnown RBP6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 TFAP2AP05549 437 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 CRIP2P52943 208 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 ATP1B3P54709 279 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 MTCP1P56278 107 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 SYNJ2BPP57105 145 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 CD81P60033 236 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 DYRK1AQ13627 763 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 MMDQ15546 238 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 MICAQ29983 383 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 SLC35D3Q5M8T2 416 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF322Q6U7Q0 402 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 ZNF565Q8N9K5 539 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 CHST4Q8NCG5 386 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 DNAAF1Q8NEP3 725 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 OR9G4Q8NGQ1 327 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 TEX47Q8TBZ9 253 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 ASB17Q8WXJ9 295 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 MCUR1Q96AQ8 359 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 FLYWCH2Q96CP2 140 aaKnown RBP6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 CMTM5Q96DZ9 223 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 CYYR1Q96J86 154 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 LRGUKQ96M69 825 aa6.37□□□□□ -1.39
HMGB1P39-201ENST00000366304 NEURL2Q9BR09 285 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms