RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 CFAP54Q96N23 3096 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 TRBV6-7A0A0A0MS04 114 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 SYNGR1O43759 233 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 PAGE4O60829 102 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 RAC3P60763 192 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 IGFBP7Q16270 282 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 KHDC3LQ587J8 217 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 ACTR3CQ9C0K3 210 aaPredicted RBP11.8□□□□□ -0.52
SGMS1-202ENST00000361781 OR2H1Q9GZK4 316 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 KIF26AQ9ULI4 1882 aaPredicted RBP11.8□□□□□ -0.52
SGMS1-202ENST00000361781 CACNA1BQ00975 2339 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
SGMS1-202ENST00000361781 COX5AP20674 150 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 OR10G4Q8NGN3 311 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 OR10G9Q8NGN4 311 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 OR10G7Q8NGN6 311 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 MOB3AQ96BX8 217 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 RAB40CQ96S21 281 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 TMEM38BQ9NVV0 291 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 SIT1Q9Y3P8 196 aa11.8□□□□□ -0.52
SGMS1-202ENST00000361781 TRAV34A0A0B4J273 112 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 ACTL6BO94805 426 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 CXCL1P09341 107 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
SGMS1-202ENST00000361781 QRFPP83859 136 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 CFHR1Q03591 330 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 RTP5Q14D33 572 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 FAM27BQ5VT28 67 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 ZNF573Q86YE8 665 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 CLN8Q9UBY8 286 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 DDTP30046 118 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 C16orf82Q7Z2V1 217 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
SGMS1-202ENST00000361781 FREM1Q5H8C1 2179 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 USF3Q68DE3 2245 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 COL6A3P12111 3177 aa11.79□□□□□ -0.52
SGMS1-202ENST00000361781 PIGBOS1A0A0B4J2F0 54 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 A8MXE2 369 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 BCL2P10415 239 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 KRTDAPP60985 99 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 DNM1P46Q6ZS02 220 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 TUSC5Q8IXB3 177 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
SGMS1-202ENST00000361781 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 MUC3AQ02505 3323 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 UBE2CO00762 179 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 TCAPO15273 167 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 PITX3O75364 302 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OPN1MWP04001 364 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OPN1MW2P0DN77 364 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OPN1MW3P0DN78 364 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 LIFP15018 202 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 FOSL1P15407 271 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OR3A1P47881 315 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 ALKBH6Q3KRA9 238 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 PYY3Q5JQD4 70 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 MS4A10Q96PG2 267 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 IGHV5-10-1A0A0J9YXX1 117 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 CDIPTO14735 213 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 NGFP01138 241 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 CSRP1P21291 193 aaKnown RBP11.78□□□□□ -0.52
SGMS1-202ENST00000361781 G6PCP35575 357 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 EIF3IQ13347 325 aaKnown RBP11.78□□□□□ -0.52
SGMS1-202ENST00000361781 TMEM211Q6ICI0 200 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
SGMS1-202ENST00000361781 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 TXN2Q99757 166 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 OR2D2Q9H210 308 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 RBKSQ9H477 322 aa11.78□□□□□ -0.52
SGMS1-202ENST00000361781 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 TIMM8AO60220 97 aaPredicted RBP11.77□□□□□ -0.52
SGMS1-202ENST00000361781 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.52
SGMS1-202ENST00000361781 ANOS1P23352 680 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 F2RP25116 425 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 DCAF12Q5T6F0 453 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 GINS3Q9BRX5 216 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.52
SGMS1-202ENST00000361781 TREM2Q9NZC2 230 aa11.77□□□□□ -0.52
SGMS1-202ENST00000361781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.77□□□□□ -0.53
SGMS1-202ENST00000361781 H0Y8G0 127 aa11.77□□□□□ -0.53
SGMS1-202ENST00000361781 SNRPCP09234 159 aaKnown RBP11.77□□□□□ -0.53
SGMS1-202ENST00000361781 PAX6P26367 422 aa11.77□□□□□ -0.53
SGMS1-202ENST00000361781 DBX2Q6ZNG2 339 aa11.77□□□□□ -0.53
SGMS1-202ENST00000361781 SELENOHQ8IZQ5 122 aaKnown RBP11.77□□□□□ -0.53
SGMS1-202ENST00000361781 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
SGMS1-202ENST00000361781 BTF3L4Q96K17 158 aa11.77□□□□□ -0.53
SGMS1-202ENST00000361781 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms