RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SPIN2BQ9BPZ2 258 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 R4GN57 208 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 FRYQ5TBA9 3013 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 TMEM50AO95807 157 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 CRYAAP02489 173 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 BRS3P32247 399 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 DNLZQ5SXM8 178 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 THEM4Q5T1C6 240 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 DOK3Q7L591 496 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 RNASEH2CQ8TDP1 164 aaKnown RBP10.97□□□□□ -0.65
VAMP1-201ENST00000361716 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 E9PLN8 166 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 COL5A1-AS1Q5SY13 56 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 MSI2Q96DH6 328 aaKnown RBP10.97□□□□□ -0.65
VAMP1-201ENST00000361716 ZDHHC11Q9H8X9 412 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
VAMP1-201ENST00000361716 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 UBE2L5PA0A1B0GUS4 154 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 C2CD4DB7Z1M9 353 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 ZNF814B7Z6K7 855 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 MPPED1O15442 326 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 SERPINA7P05543 415 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 CD38P28907 300 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 ECI1P42126 302 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-201ENST00000361716 TAS2R30P59541 319 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.65
VAMP1-201ENST00000361716 ERRFI1Q9UJM3 462 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-201ENST00000361716 PGPEP1LA6NFU8 196 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 B4E171 279 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 CLPSP04118 112 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 TSPAN7P41732 249 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 ACOT6Q3I5F7 207 aaPredicted RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 KCNK17Q96T54 332 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 TMEM9BQ9NQ34 198 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 MANBALQ9NQG1 85 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 CEACAM8P31997 349 aaPredicted RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 TGFBR3Q03167 851 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 Q6ZN92 141 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 RCC1LQ96I51 464 aaKnown RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 SGCZQ96LD1 299 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 LYRM2Q9NU23 88 aaPredicted RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 MRPS18CQ9Y3D5 142 aaKnown RBP10.96□□□□□ -0.66
VAMP1-201ENST00000361716 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.66
VAMP1-201ENST00000361716 A0A1B0GW64 132 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 C3orf80F5H4A9 247 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
VAMP1-201ENST00000361716 CDKN1AP38936 164 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 CEACAM6P40199 344 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 PSMB3P49720 205 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 RND2P52198 227 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 EFNA3P52797 238 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 TMEM183BQ1AE95 376 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 GBGT1Q8N5D6 347 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 HLA-CQ95604 372 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 OBP2AQ9NY56 170 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 SELENOKQ9Y6D0 94 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 ASPMQ8IZT6 3477 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 M0R135 149 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 TSPAN2O60636 221 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 HRASP01112 189 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 SERPINE2P07093 398 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 LINC00614P0C842 121 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 RPL23P62829 140 aaKnown RBP10.95□□□□□ -0.66
VAMP1-201ENST00000361716 TMPRSS7Q7RTY8 843 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 GAPTQ8N292 157 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 NOXO1Q8NFA2 376 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 MRPL30Q8TCC3 161 aaKnown RBP10.95□□□□□ -0.66
VAMP1-201ENST00000361716 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 ZNF799Q96GE5 643 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 C18orf12Q96KH6 178 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 ULBP2Q9BZM5 246 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 ST3GAL6Q9Y274 331 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 HS3ST3A1Q9Y663 406 aa10.95□□□□□ -0.66
VAMP1-201ENST00000361716 NCOA6Q14686 2063 aaPredicted RBP10.95□□□□□ -0.66
VAMP1-201ENST00000361716 TRDCB7Z8K6 153 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 OR5G3P0C626 314 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 DRD1P21728 446 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 SYT13Q7L8C5 426 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
VAMP1-201ENST00000361716 OR6C1Q96RD1 312 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 CTDSP1Q9GZU7 261 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 PARLQ9H300 379 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 GTF3C1Q12789 2109 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 FREM2Q5SZK8 3169 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 PPYP01298 95 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 GYPAP02724 150 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 IGKV3-11P04433 115 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 ZNF17P17021 662 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 GALNSP34059 522 aa10.94□□□□□ -0.66
VAMP1-201ENST00000361716 RAB35Q15286 201 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms