RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CHST5Q9GZS9 411 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 SH3BGRL3Q9H299 93 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 TEPPQ6URK8 271 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF738Q8NE65 137 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 FFAR1O14842 300 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 PPYP01298 95 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 PTHLHP12272 177 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 FCARP24071 287 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 MPV17P39210 176 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 TMEM30BQ3MIR4 351 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 PRSS54Q6PEW0 395 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 DNM1P46Q6ZS02 220 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 SLC25A45Q8N413 288 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 OR4X2Q8NGF9 303 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 RNF133Q8WVZ7 376 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 POM121Q96HA1 1249 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 LAMB1P07942 1786 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 MOSPD3O75425 235 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 DEDDO75618 318 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 INHBBP09529 407 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 HMGA2P52926 109 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 LGALSLQ3ZCW2 172 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 NEU4Q8WWR8 484 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 FAM210BQ96KR6 192 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 LURAP1Q96LR2 239 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 MRM2Q9UI43 246 aaKnown RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 CLDN34H7C241 214 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 RHBDL1O75783 438 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 APELAP0DMC3 54 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 GAPTQ8N292 157 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 ST6GAL2Q96JF0 529 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 GUCD1Q96NT3 240 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 C9orf170A2RU37 121 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 DHRS7CA6NNS2 312 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 MIDNQ504T8 468 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 TEX261Q6UWH6 196 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF385AQ96PM9 386 aaKnown RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 U3KQ87 197 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 IGHV1-69-2A0A0G2JMI3 117 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 A0A1B0GU03 582 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 KIAA1324LA8MWY0 1029 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 SPINK4O60575 86 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 CSRP1P21291 193 aaKnown RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 ZP4Q12836 540 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 TGIF2Q9GZN2 237 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 CCL28Q9NRJ3 127 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 FLRT3Q9NZU0 649 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 APOBEC3AP31941 199 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 MFAP4P55083 255 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 DHRS2Q13268 280 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 CEACAM21Q3KPI0 293 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 RELL2Q8NC24 303 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 MRPL30Q8TCC3 161 aaKnown RBP9.54□□□□□ -0.88
CLIP1-203ENST00000361654 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
CLIP1-203ENST00000361654 UPK3AO75631 287 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SELENOTP62341 195 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SPINK2P20155 84 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 P2RY1P47900 373 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 B2MP61769 119 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 ARF6P62330 175 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 RAB32Q13637 225 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF561Q8N587 486 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 NHSL1Q5SYE7 1610 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 CFDP00746 253 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SNRPD3P62318 126 aaKnown RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 TIAL1Q01085 375 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 NSUN5P2Q63ZY6 315 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 C12orf57Q99622 126 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SCN9AQ15858 1988 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF207O43670 478 aaKnown RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 POLR2GP62487 172 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 OR8G5Q8NG78 346 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 FAM168AQ92567 244 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 VAMP8Q9BV40 100 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 PTP4A3O75365 173 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 G6PCP35575 357 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-203ENST00000361654 BVESQ8NE79 360 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 OR1K1Q8NGR3 316 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 PGLYRP3Q96LB9 341 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 SRD5A3Q9H8P0 318 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 HS3ST3B1Q9Y662 390 aa9.53□□□□□ -0.88
CLIP1-203ENST00000361654 A0A1W2PPE3 182 aa9.52□□□□□ -0.88
CLIP1-203ENST00000361654 ASPDHA6ND91 283 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms