RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 HIST1H4GQ99525 98 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 TRGC2P03986 189 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 SGMS2Q8NHU3 365 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 CXorf65A6NEN9 183 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 COL10A1Q03692 680 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF519Q8TB69 540 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 PITX3O75364 302 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 TTC32Q5I0X7 151 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 SPEM1Q8N4L4 309 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 PGLYRP4Q96LB8 373 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 WFIKKN1Q96NZ8 548 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 FLRT3Q9NZU0 649 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 CES1P1Q9UKY3 287 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 KBTBD11O94819 623 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 GUCA2BQ16661 112 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 AMMECR1LQ6DCA0 310 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 PRNDQ9UKY0 176 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 PLAUP00749 431 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 SRD5A2P31213 254 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 IL11RAQ14626 422 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 GCSAMLQ5JQS6 135 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 FAM209AQ5JX71 171 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 RBM38Q9H0Z9 239 aaKnown RBP14.03□□□□□ -0.16
COL18A1-203ENST00000359759 MYH14Q7Z406 1995 aaKnown RBP14.03□□□□□ -0.16
COL18A1-203ENST00000359759 MUC1P15941 1255 aaPredicted RBP14.03□□□□□ -0.16
COL18A1-203ENST00000359759 PPP1CCP36873 323 aaKnown RBP14.03□□□□□ -0.16
COL18A1-203ENST00000359759 PLAURQ03405 335 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 COX19Q49B96 90 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 CD300LDQ6UXZ3 194 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 PTP4A1Q93096 173 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 OR2W1Q9Y3N9 320 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 KCNMB2Q9Y691 235 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 HRKO00198 91 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 EML2O95834 649 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 HOXA6P31267 233 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 ANKRD33Q7Z3H0 272 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF665Q9H7R5 613 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 J3QR06 171 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 KLK2P20151 261 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 VDAC1P21796 283 aa14.03□□□□□ -0.16
COL18A1-203ENST00000359759 MAST2Q6P0Q8 1798 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.16
COL18A1-203ENST00000359759 TRBV23-1A0A0A0MS06 115 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 TGIF2-C20orf24A0A0A6YYL0 155 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 NUDT3O95989 172 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 ID1P41134 155 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 LOXL3P58215 753 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 FAM209BQ5JX69 171 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 WDR25Q64LD2 544 aaPredicted RBP14.02□□□□□ -0.16
COL18A1-203ENST00000359759 ADAMTS17Q8TE56 1095 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 RNF122Q9H9V4 155 aa14.02□□□□□ -0.16
COL18A1-203ENST00000359759 IGHV1OR21-1A0A087WYE8 117 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 FAM74A7A6NL05 159 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 SYNGR1O43759 233 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 NDUFB4O95168 129 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 PEX11BO96011 259 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 CLPPQ16740 277 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-203ENST00000359759 PCGF1Q9BSM1 259 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 MMP16P51512 607 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 RPP25Q9BUL9 199 aaKnown RBP14.02□□□□□ -0.17
COL18A1-203ENST00000359759 BEX4Q9NWD9 120 aaPredicted RBP14.02□□□□□ -0.17
COL18A1-203ENST00000359759 EIF3GO75821 320 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL18A1-203ENST00000359759 SOD3P08294 240 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 ZNF735P0CB33 412 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 ATOH7Q8N100 152 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 SLC25A40Q8TBP6 338 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 OR2H1Q9GZK4 316 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 FAM60AQ9NP50 221 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 RNF7Q9UBF6 113 aa14.02□□□□□ -0.17
COL18A1-203ENST00000359759 IGKV3OR2-268A0A0C4DH90 116 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 LINC00862A6NCI5 91 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 ID4P47928 161 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 MAS1LP35410 378 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 KIR3DL2P43630 455 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 ASB5Q8WWX0 329 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 UCN2Q96RP3 112 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 OR5AC2Q9NZP5 309 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 ERVFRD-1P60508 538 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 A0A1B0GU03 582 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 LIPT2A6NK58 231 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 FXYD3Q14802 87 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 SURF2Q15527 256 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-203ENST00000359759 MMDQ15546 238 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 TMEM238LA0A1B0GVL6 79 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 A6NJY4 79 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 RPL36A-HNRNPH2H7BZ11 118 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 CXCL2P19875 107 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 C9orf50Q5SZB4 431 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 UBALD2Q8IYN6 164 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 TPRX1Q8N7U7 411 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 NUP205Q92621 2012 aa14.01□□□□□ -0.17
COL18A1-203ENST00000359759 TSPAN13O95857 204 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 IZUMO4Q1ZYL8 232 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 NEU1Q99519 415 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 RAXQ9Y2V3 346 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 PLA2G10O15496 165 aa14□□□□□ -0.17
COL18A1-203ENST00000359759 CKS2P33552 79 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms