RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 FOXI3A8MTJ6 420 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-203ENST00000357654 LDLRAD4O15165 306 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 IGHV3-48P01763 117 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 HOXD3P31249 432 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-203ENST00000357654 DAPP51397 102 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 CLLU1Q5K131 121 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 MBNL2Q5VZF2 373 aaKnown RBP5.09□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF385CQ66K41 422 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-203ENST00000357654 BPIFA4PQ86YQ2 179 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 KIR3DL3Q8N743 410 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 SFXN3Q9BWM7 321 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 PEMTQ9UBM1 199 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 LRP12Q9Y561 859 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 CITO14578 2027 aa5.09□□□□□ -1.59
BRCA1-203ENST00000357654 A0A087WUJ7 227 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 MUC21A0A0G2JKD1 596 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 MUC21A0A140T8X8 626 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 LINC01387J3KSC0 135 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 VENTXO95231 258 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 CD3DP04234 171 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 PNLIPP16233 465 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 DYNLT3P51808 116 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 NPC2P61916 151 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 MUC21Q5SSG8 566 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 LDLRAD2Q5SZI1 272 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 RPS4Y2Q8TD47 263 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 ARHGAP5-AS1Q96IT6 56 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM106BQ9NUM4 274 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 IGHV1OR15-9A0A0B4J2B8 117 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 RPL27AP46776 148 aaKnown RBP5.09□□□□□ -1.6
BRCA1-203ENST00000357654 MMP16P51512 607 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 RAC3P60763 192 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 TGIF1Q15583 401 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 PEAR1Q5VY43 1037 aaPredicted RBP5.09□□□□□ -1.6
BRCA1-203ENST00000357654 DTX2Q86UW9 622 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 SELENOHQ8IZQ5 122 aaKnown RBP5.09□□□□□ -1.6
BRCA1-203ENST00000357654 MDS2Q8NDY4 140 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 PGLYRP4Q96LB8 373 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 OR2V2Q96R30 315 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 TEAD3Q99594 435 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 HS3ST2Q9Y278 367 aa5.09□□□□□ -1.6
BRCA1-203ENST00000357654 IGKV6D-41A0A0C4DH26 115 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 MAP1LC3B2A6NCE7 125 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 LEUTXA8MZ59 168 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ABLIM3O94929 683 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 IGHV3-53P01767 116 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PGA4P0DJD7 388 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PGA3P0DJD8 388 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PGA5P0DJD9 388 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 MFAP2P55001 183 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 EMX1Q04741 257 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZXDCQ2QGD7 858 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PLK5Q496M5 336 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 C10orf128Q5T292 105 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 LDLRAD1Q5T700 205 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF384Q8TF68 577 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 MBD3L1Q8WWY6 194 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PTP4A1Q93096 173 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 C2orf50Q96LR7 162 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 MAP1LC3BQ9GZQ8 125 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 KCNE3Q9Y6H6 103 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 M0R381 172 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 KBTBD11O94819 623 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 S1PR2O95136 353 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 LIPFP07098 398 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 GLULP15104 373 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 COL9A1P20849 921 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PFN3P60673 137 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ELOBQ15370 118 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 HLA-DRB5Q30154 266 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TCTEX1D1Q8N7M0 179 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 STPG3Q8N7X2 389 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF768Q9H5H4 540 aaKnown RBP5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZDHHC18Q9NUE0 388 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 AMY1AP04745 511 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PRB4P10163 310 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-203ENST00000357654 DCTDP32321 178 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TEX30Q5JUR7 227 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 AFMIDQ63HM1 303 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 COLCA1Q6ZS62 124 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF383Q8NA42 475 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF488Q96MN9 340 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 VSTM2LQ96N03 204 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 PRELID3AQ96N28 172 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TUBD1Q9UJT1 453 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 CTSDP07339 412 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-203ENST00000357654 CD37P11049 281 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 DAOP14920 347 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 FXYD7P58549 80 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 DGCR2P98153 550 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 SPCS2Q15005 226 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 SPTY2D1-AS1A0A0U1RR47 76 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 J3QR06 171 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TAAR5O14804 337 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 ASAH1Q13510 395 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 MIDNQ504T8 468 aa5.08□□□□□ -1.6
BRCA1-203ENST00000357654 TSPO2Q5TGU0 170 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms