RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ACP1P24666 158 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 GUCD1Q96NT3 240 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CNTD2Q9H8S5 307 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PRDM7Q9NQW5 492 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CACNG4Q9UBN1 327 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 LAMTOR5O43504 91 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 OR2J2O76002 312 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 DOK5Q9P104 306 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 C19orf67A6NJJ6 358 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 AKR7A3O95154 331 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 TMIGD3P0DMS9 266 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 TNFSF10P50591 281 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ANKRD33Q7Z3H0 272 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 OR10AG1Q8NH19 301 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 TBX15Q96SF7 602 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 AGAP20933 346 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 RELBQ01201 579 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 FAM78AQ5JUQ0 283 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 DMRTA1Q5VZB9 504 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF683Q8IZ20 524 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 METTL27Q8N6F8 245 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 RND3P61587 244 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CLEC12BQ2HXU8 276 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 FAM27D1Q5T7N8 215 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF468Q5VIY5 522 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 OR10G3Q8NGC4 313 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 FCMRO60667 390 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CCL5P13501 91 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SRYQ05066 204 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ASCL5Q7RTU5 278 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 DTD1Q8TEA8 209 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PARD6GQ9BYG4 376 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SH3BGRL3Q9H299 93 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SLC7A10Q9NS82 523 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CLEC5AQ9NY25 188 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SERGEFQ9UGK8 458 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PCOLCE2Q9UKZ9 415 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 TRBV5-7A0A0A0MS05 114 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 H0Y8G0 127 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 FAHP16930 419 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CXCL12P48061 93 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CADM4Q8NFZ8 388 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 RNF122Q9H9V4 155 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PLPP3O14495 311 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 IGFBP1P08833 259 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 CEACAM3P40198 252 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 KLF3P57682 345 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SRSF5Q13243 272 aaKnown RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SLC26A1Q9H2B4 701 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ATXN7L1Q9ULK2 861 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 TRBV24-1A0A075B6N3 115 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 RSPO2Q6UXX9 243 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 BOD1L2Q8IYS8 172 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PAAF1Q9BRP4 392 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 AUP1Q9Y679 476 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ODAMA1E959 279 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ETHE1O95571 254 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PRRX1P54821 245 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 ACER2Q5QJU3 275 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SLC16A13Q7RTY0 426 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 GSN-AS1Q9NRJ2 163 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 PRICKLE3O43900 615 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 GABRG2P18507 467 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 ACSF3Q4G176 576 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 OR4X2Q8NGF9 303 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 LINC00597Q9H2U6 94 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 C20orf141Q9NUB4 165 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 DSCAMO60469 2012 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PCNX3Q9H6A9 2034 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 GPX4P36969 197 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 SRSF9Q13242 221 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MARCH3Q86UD3 253 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 OR6C1Q96RD1 312 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CCDC144NLQ6NUI1 221 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 EDDM3BP56851 147 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PPP2CBP62714 309 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PPP2CAP67775 309 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 KLHDC9Q8NEP7 349 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 RND1Q92730 232 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 DUSP13Q9UII6 198 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PLXNA2O75051 1894 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 LINC01553A4QN01 128 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 FAM78BQ5VT40 261 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF385CQ66K41 422 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 RHBDD2Q6NTF9 364 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MEGF10Q96KG7 1140 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MIEN1Q9BRT3 115 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 SERTM2A0A1B0GWG4 89 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PPBPP02775 128 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 F2RP25116 425 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CACNG8Q8WXS5 425 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 TRBV6-7A0A0A0MS04 114 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CDC14CA4D256 554 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 RECKO95980 971 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF658BQ4V348 819 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 TMEM116Q8NCL8 245 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 OR10V1Q8NGI7 309 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 HSD17B8Q92506 261 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CDCP1Q9H5V8 836 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms