RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SYNGR1O43759 233 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 CYB5R3P00387 301 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 HBE1P02100 147 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SERPINE2P07093 398 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 EGR1P18146 543 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SP5Q6BEB4 398 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF66Q6ZN08 573 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 AAED1Q7RTV5 226 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 WDR5BQ86VZ2 330 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 CPEB3Q8NE35 698 aaKnown RBP8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ABHD3Q8WU67 409 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 HIST1H2AAQ96QV6 131 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 PROK2Q9HC23 129 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 SDF2L1Q9HCN8 221 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 OR1A1Q9P1Q5 309 aa8.67□□□□□ -1.02
PTPRA-203ENST00000356147 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-203ENST00000356147 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 TRAPPC6AO75865 159 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 CD33P20138 364 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 CCL7P80098 99 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF124Q15973 351 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 HAPLN4Q86UW8 402 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF845Q96IR2 970 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-203ENST00000356147 SLC25A22Q9H936 323 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 OR14J1Q9UGF5 321 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 PI4KAP42356 2102 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 DNAJC13O75165 2243 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 NR2C1P13056 603 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 LIFP15018 202 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 FOSL1P15407 271 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 UCP1P25874 307 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 IDH3GP51553 393 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-203ENST00000356147 FOXG1P55316 489 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-203ENST00000356147 TAS2R60P59551 318 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 SSTP61278 116 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 RABEPKQ7Z6M1 372 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 VASH2Q86V25 355 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 OR10A7Q8NGE5 316 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 LURAP1Q96LR2 239 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 FOXB1Q99853 325 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 OR2H1Q9GZK4 316 aa8.66□□□□□ -1.02
PTPRA-203ENST00000356147 RBM7Q9Y580 266 aaKnown RBP8.66□□□□□ -1.02
PTPRA-203ENST00000356147 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 LRRC3CA6NJW4 275 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 DKK1O94907 266 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 IFNA10P01566 189 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 OR4A8P0C604 315 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 RFPL3SP0C7P2 107 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 SRPXP78539 464 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 IL24Q13007 206 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 EIF3IQ13347 325 aaKnown RBP8.65□□□□□ -1.02
PTPRA-203ENST00000356147 FAM53AQ6NSI3 398 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-203ENST00000356147 ASCL4Q6XD76 172 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 C10orf35Q96D05 121 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 MTCH1Q9NZJ7 389 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 FUT9Q9Y231 359 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 CACNA1EQ15878 2313 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 DSPP15924 2871 aaKnown RBP8.65□□□□□ -1.02
PTPRA-203ENST00000356147 USF3Q68DE3 2245 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 PMP22Q01453 160 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 NCR3LG1Q68D85 454 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM42Q69YG0 159 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 LHX4Q969G2 390 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 PTRH2Q9Y3E5 179 aaKnown RBP8.65□□□□□ -1.02
PTPRA-203ENST00000356147 GTF3C1Q12789 2109 aa8.65□□□□□ -1.02
PTPRA-203ENST00000356147 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 KIAA1324LA8MWY0 1029 aaPredicted RBP8.65□□□□□ -1.03
PTPRA-203ENST00000356147 LILRA1O75019 489 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 WDR1O75083 606 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 ZNF737O75373 536 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 IL18BPO95998 194 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 F2RP25116 425 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 GNB2P62879 340 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 ZXDAP98168 799 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 SRYQ05066 204 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 PRDX4Q13162 271 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 PMS2P11Q13670 270 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 SPINK9Q5DT21 86 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.03
PTPRA-203ENST00000356147 FOXL2NBQ6ZUU3 175 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 SMRP1Q8NCR6 262 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 OR13D1Q8NGV5 346 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 OR1P1Q8NH06 330 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 HLA-CQ95604 372 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 OR4C12Q96R67 309 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 PITPNC1Q9UKF7 332 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 KCNS2Q9ULS6 477 aa8.65□□□□□ -1.03
PTPRA-203ENST00000356147 OR6C6A6NF89 314 aa8.64□□□□□ -1.03
PTPRA-203ENST00000356147 NGFP01138 241 aa8.64□□□□□ -1.03
PTPRA-203ENST00000356147 IGKV1-39P01597 117 aa8.64□□□□□ -1.03
PTPRA-203ENST00000356147 IGKV1D-39P04432 117 aa8.64□□□□□ -1.03
PTPRA-203ENST00000356147 RND2P52198 227 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms