RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 ZDHHC22Q8N966 263 aa19.9■□□□□ 0.78
CHKA-202ENST00000356135 MED28Q9H204 178 aa19.9■□□□□ 0.78
CHKA-202ENST00000356135 C19orf12Q9NSK7 152 aa19.9■□□□□ 0.78
CHKA-202ENST00000356135 UNC79Q9P2D8 2635 aa19.89■□□□□ 0.78
CHKA-202ENST00000356135 ANKRD17O75179 2603 aaKnown RBP19.89■□□□□ 0.77
CHKA-202ENST00000356135 TRBV6-6A0A0A6YYG2 114 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 SNRPGP15A8MWD9 76 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 F5H0A9 414 aaPredicted RBP19.89■□□□□ 0.77
CHKA-202ENST00000356135 IGHV2-5P01817 119 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 SCTP09683 121 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 GSTT2P0CG29 244 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 VSIG10L2P0DP72 767 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 LMO4P61968 165 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 PAX5Q02548 391 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 CDK10Q15131 360 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 SRSF7Q16629 238 aaKnown RBP eCLIP19.89■□□□□ 0.77
CHKA-202ENST00000356135 WDR25Q64LD2 544 aaPredicted RBP19.89■□□□□ 0.77
CHKA-202ENST00000356135 Q6ZS49 121 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 GPN1Q9HCN4 374 aaPredicted RBP19.89■□□□□ 0.77
CHKA-202ENST00000356135 CLN8Q9UBY8 286 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 ZNF221Q9UK13 617 aa19.89■□□□□ 0.77
CHKA-202ENST00000356135 H7C1Q1 480 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 ERP29P30040 261 aaKnown RBP19.88■□□□□ 0.77
CHKA-202ENST00000356135 IL2RGP31785 369 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 DSCR9P59020 149 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 TCF23Q7RTU1 214 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 LHFPL1Q86WI0 220 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 TMEM17Q86X19 198 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 PRR18Q8N4B5 295 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 TERB2Q8NHR7 220 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 MBNL3Q9NUK0 354 aaKnown RBP19.88■□□□□ 0.77
CHKA-202ENST00000356135 EHFQ9NZC4 300 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 PDZD2O15018 2839 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 GNB2P62879 340 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 Q5PR19 223 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 ZNF626Q68DY1 528 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 DACT3Q96B18 629 aaPredicted RBP19.88■□□□□ 0.77
CHKA-202ENST00000356135 SEC22CQ9BRL7 303 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 ZNF286AQ9HBT8 521 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 VSIG4Q9Y279 399 aa19.88■□□□□ 0.77
CHKA-202ENST00000356135 GLP1RP43220 463 aa19.87■□□□□ 0.77
CHKA-202ENST00000356135 ARPC4P59998 168 aa19.87■□□□□ 0.77
CHKA-202ENST00000356135 RPL31P62899 125 aaKnown RBP19.87■□□□□ 0.77
CHKA-202ENST00000356135 KRTAP1-3Q8IUG1 177 aa19.87■□□□□ 0.77
CHKA-202ENST00000356135 TRDCB7Z8K6 153 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 CREBL2O60519 120 aaPredicted RBP19.86■□□□□ 0.77
CHKA-202ENST00000356135 SSTR5P35346 364 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 TSPAN5P62079 268 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 FCN2Q15485 313 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 TMEM200BQ69YZ2 307 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 TAF9BQ9HBM6 251 aa19.86■□□□□ 0.77
CHKA-202ENST00000356135 A8MV72 311 aaPredicted RBP19.85■□□□□ 0.77
CHKA-202ENST00000356135 C12orf77C9JDV5 145 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 ZFP36P26651 326 aaKnown RBP19.85■□□□□ 0.77
CHKA-202ENST00000356135 ZNF273Q14593 569 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 IGSF11Q5DX21 431 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 RFESDQ8TAC1 157 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 SSBP3Q9BWW4 388 aaPredicted RBP19.85■□□□□ 0.77
CHKA-202ENST00000356135 RANGRFQ9HD47 186 aaPredicted RBP19.85■□□□□ 0.77
CHKA-202ENST00000356135 NECAP2Q9NVZ3 263 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 SDCBPO00560 298 aaPredicted RBP19.85■□□□□ 0.77
CHKA-202ENST00000356135 SULT1A3P0DMM9 295 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 SULT1A4P0DMN0 295 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 ERVFRD-1P60508 538 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 CD83Q01151 205 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 TCTE3Q8IZS6 198 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 FAM185AQ8N0U4 392 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 ZNF565Q8N9K5 539 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 OR1L1Q8NH94 360 aa19.85■□□□□ 0.77
CHKA-202ENST00000356135 KIAA2026Q5HYC2 2103 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 IGKV1-6A0A0C4DH72 117 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 POM121CA8CG34 1229 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 SSNA1O43805 119 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 HLA-DRB3P79483 266 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 ESCO2Q56NI9 601 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 AADACL3Q5VUY0 350 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 FAM53AQ6NSI3 398 aaPredicted RBP19.84■□□□□ 0.77
CHKA-202ENST00000356135 OR11H7Q8NGC8 314 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 KIRREL1Q96J84 757 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 OR6C3Q9NZP0 311 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 ITPR2Q14571 2701 aa19.84■□□□□ 0.77
CHKA-202ENST00000356135 NAV2Q8IVL1 2488 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 C22orf46C9J442 243 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 FABP7O15540 132 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 CCL3L1P16619 93 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 OMGP23515 440 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 EIF2B2P49770 351 aaKnown RBP19.83■□□□□ 0.77
CHKA-202ENST00000356135 NPY4RP50391 375 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 HERPUD1Q15011 391 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 HMGN3Q15651 99 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 CR1LQ2VPA4 569 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 ZNF660Q6AZW8 331 aaPredicted RBP19.83■□□□□ 0.77
CHKA-202ENST00000356135 TMED4Q7Z7H5 227 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 SLC25A42Q86VD7 318 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 ARL11Q969Q4 196 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 NCOR1P1Q9H4R4 102 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 KCNIP1Q9NZI2 227 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 ZNF69Q9UC07 566 aa19.83■□□□□ 0.77
CHKA-202ENST00000356135 TRGV10A0A0A0MS01 117 aa19.83■□□□□ 0.76
CHKA-202ENST00000356135 hADV38S2A0JD32 116 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms