RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 DOK3Q7L591 496 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 NXT1Q9UKK6 140 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 NSG2Q9Y328 171 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 PRRC2CQ9Y520 2896 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 EXPH5Q8NEV8 1989 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 IGLV3-12A0A075B6K2 115 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 SPRY1O43609 319 aaPredicted RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 HPNP05981 417 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 MAS1LP35410 378 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 GALR1P47211 349 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 RRADP55042 308 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 KRTDAPP60985 99 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 RIPPLY2Q5TAB7 128 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 GBGT1Q8N5D6 347 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 PTRH2Q9Y3E5 179 aaKnown RBP8.1□□□□□ -1.11
SMG6-202ENST00000354901 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
SMG6-202ENST00000354901 GTF3C1Q12789 2109 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 ZNF407Q9C0G0 2248 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 J3QW42 95 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 K7N7A8 449 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 CFIP05156 583 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 FPR2P25090 351 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 RIPPLY3P57055 190 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 GNMTQ14749 295 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 ATP6V1FQ16864 119 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 NUFIP2Q7Z417 695 aaKnown RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 PLEKHJ1Q9NW61 149 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 ZFP30Q9Y2G7 519 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 FREM1Q5H8C1 2179 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SSSCA1O60232 199 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 IL6RP08887 468 aaPredicted RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 MSR1P21757 451 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 CHRNA7P36544 502 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 PLA2G5P39877 138 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 LDLRAD2Q5SZI1 272 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 Q7L0L9 218 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 STPG4Q8N801 248 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 OR14L1PQ8NHC6 308 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 LYPD6BQ8NI32 183 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SCGB3A2Q96PL1 93 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 TECTBQ96PL2 329 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SMIM7Q9BQ49 75 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 MOB1AQ9H8S9 216 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 A0A087WWC5 75 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 NDUFS8O00217 210 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 TNFSF11O14788 317 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SNAI3Q3KNW1 292 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 TMEM41BQ5BJD5 291 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 Q6ZN92 141 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 LYG1Q8N1E2 194 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 CORO2AQ92828 525 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 SLC35E1Q96K37 410 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 GPHA2Q96T91 129 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 PECRQ9BY49 303 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 ZNF552Q9H707 407 aaPredicted RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 C19orf25Q9UFG5 118 aaPredicted RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 CHCHD2Q9Y6H1 151 aaPredicted RBP8.09□□□□□ -1.11
SMG6-202ENST00000354901 FRYQ5TBA9 3013 aa8.09□□□□□ -1.11
SMG6-202ENST00000354901 M0R135 149 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 NUPR1O60356 82 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 GOSR1O95249 250 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 CRYABP02511 175 aaKnown RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 OPN1MWP04001 364 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 OPN1MW2P0DN77 364 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 OPN1MW3P0DN78 364 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 CCL4P13236 92 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 GZMHP20718 246 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 HOXC12P31275 282 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 BMI1P35226 326 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 LGI3Q8N145 548 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 ZNF799Q96GE5 643 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 ULBP2Q9BZM5 246 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 ZNF430Q9H8G1 570 aaPredicted RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 COL5A1P20908 1838 aaPredicted RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 LNP1A1A4G5 178 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 MTCP1P56278 107 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 PIGPP57054 158 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 YRDCQ86U90 279 aaKnown RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 GJC3Q8NFK1 279 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 RNASEH2CQ8TDP1 164 aaKnown RBP8.08□□□□□ -1.12
SMG6-202ENST00000354901 KIAA1456Q9P272 454 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 VAX2Q9UIW0 290 aa8.08□□□□□ -1.12
SMG6-202ENST00000354901 IGHV3-9P01782 118 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms