RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SIRT4Q9Y6E7 314 aaPredicted RBP12.48□□□□□ -0.41
PDGFA-201ENST00000354513 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 IGHV3-72A0A0B4J1Y9 119 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 HSMCR30P0CW71 290 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 RAB3AP20336 220 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 REG1BP48304 166 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 KCNJ3P48549 501 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
PDGFA-201ENST00000354513 DOC2BQ14184 412 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 SLC16A12Q6ZSM3 486 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 ZNF367Q7RTV3 350 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 SLC35E3Q7Z769 313 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 SATL1Q86VE3 508 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 IZUMO1Q8IYV9 350 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 Q8N9W7 124 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 OR51D1Q8NGF3 324 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 ST6GALNAC6Q969X2 333 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 RAX2Q96IS3 184 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 EAF1Q96JC9 268 aaPredicted RBP12.47□□□□□ -0.41
PDGFA-201ENST00000354513 DPCDQ9BVM2 203 aaPredicted RBP12.47□□□□□ -0.41
PDGFA-201ENST00000354513 BARHL1Q9BZE3 327 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 IL36GQ9NZH8 169 aa12.47□□□□□ -0.41
PDGFA-201ENST00000354513 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
PDGFA-201ENST00000354513 PNMA8CA0A1B0GUJ8 204 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 A0A1W2PP11 408 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 GEMIN2O14893 280 aaKnown RBP12.46□□□□□ -0.41
PDGFA-201ENST00000354513 OGG1O15527 345 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 HTR3BO95264 441 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 RPSAP08865 295 aaKnown RBP12.46□□□□□ -0.41
PDGFA-201ENST00000354513 VSIG8P0DPA2 414 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 MYCNOSP40205 109 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 RSU1Q15404 277 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 LINC00311Q8N616 119 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 FCGR1BQ92637 280 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 GPER1Q99527 375 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 ST3GAL6Q9Y274 331 aa12.46□□□□□ -0.41
PDGFA-201ENST00000354513 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
PDGFA-201ENST00000354513 SLC31A2O15432 143 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 RPLP1P05386 114 aaKnown RBP12.45□□□□□ -0.42
PDGFA-201ENST00000354513 CELP19835 753 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 GPR12P47775 334 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 CFHR3Q02985 330 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 NEDD8Q15843 81 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 UBE2UQ5VVX9 321 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 DMKNQ6E0U4 476 aaPredicted RBP12.45□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 OR10X1Q8NGY0 326 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 SMIM19Q96E16 107 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 MGLLQ99685 303 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 GPR61Q9BZJ8 451 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 VCX3AQ9NNX9 186 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 ISYNA1Q9NPH2 558 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 GFOD1Q9NXC2 390 aa12.45□□□□□ -0.42
PDGFA-201ENST00000354513 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 PSMB9P28065 219 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 SLC6A1P30531 599 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 CD69Q07108 199 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 MLLT11Q13015 90 aaPredicted RBP12.44□□□□□ -0.42
PDGFA-201ENST00000354513 MOB3BQ86TA1 216 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 TGIF2LXQ8IUE1 241 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF695Q8IW36 515 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 RNF152Q8N8N0 203 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
PDGFA-201ENST00000354513 UFD1Q92890 307 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 HSPB9Q9BQS6 159 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
PDGFA-201ENST00000354513 LIN7CQ9NUP9 197 aaKnown RBP12.44□□□□□ -0.42
PDGFA-201ENST00000354513 TMEM30CPA0ZSE6 113 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 CCRL2O00421 344 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 OR7C1O76099 320 aaPredicted RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 SMIM18P0DKX4 95 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 IGFBP3P17936 291 aaPredicted RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 SERPINA2P20848 420 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 LUMP51884 338 aaPredicted RBP12.43□□□□□ -0.42
PDGFA-201ENST00000354513 NKAPLQ5M9Q1 402 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 DDI2Q5TDH0 399 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 COMMD1Q8N668 190 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 GPR148Q8TDV2 347 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 DPF1Q92782 380 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 GHSRQ92847 366 aa12.43□□□□□ -0.42
PDGFA-201ENST00000354513 CPNE2Q96FN4 548 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms