RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PSG2P11465 335 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 TSPAN7P41732 249 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 CDX1P47902 265 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF610Q8N9Z0 462 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 OR51H1Q8NH63 302 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 PSMF1Q92530 271 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF488Q96MN9 340 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 CD300LBA8K4G0 201 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 IFNA5P01569 189 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 TUSC5Q8IXB3 177 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 OR10J5Q8NHC4 309 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 POM121L2Q96KW2 1035 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 GGACTQ9BVM4 153 aa20.88■□□□□ 0.93
CPNE1-202ENST00000352393 TRAV20A0A0B4J274 112 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 SERPINE2P07093 398 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 CLDN18P56856 261 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF674Q2M3X9 581 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 P4HA3Q7Z4N8 544 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 MAFAQ8NHW3 353 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-202ENST00000352393 CT55Q8WUE5 264 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2AAQ96QV6 131 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 OPA3Q9H6K4 179 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF703Q9H7S9 590 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF407Q9C0G0 2248 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 TGIF2-C20orf24A0A0A6YYL0 155 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 SRYQ05066 204 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 FAM90A2PQ658T7 463 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 Q6ZRM9 215 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 RDH5Q92781 318 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 DOK5Q9P104 306 aa20.87■□□□□ 0.93
CPNE1-202ENST00000352393 NPIPB11E5RHQ5 1161 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 DEGS1O15121 323 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 CNOT4O95628 575 aaKnown RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 IGKV1-39P01597 117 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 IGKV1D-39P04432 117 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 PEAR1Q5VY43 1037 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 ERRFI1Q9UJM3 462 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 URGCP-MRPS24S4R325 110 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 B4DEV8 164 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 HS3ST1O14792 307 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 ATXN7O15265 892 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 CELA3AP09093 270 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 SSPNQ14714 243 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 IZUMO4Q1ZYL8 232 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 SPINK14Q6IE38 97 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 LSM10Q969L4 123 aaKnown RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 CISD1Q9NZ45 108 aaKnown RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 LRFN1Q9P244 771 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 GNG13Q9P2W3 67 aa20.86■□□□□ 0.93
CPNE1-202ENST00000352393 ZMAT5Q9UDW3 170 aaKnown RBP20.86■□□□□ 0.93
CPNE1-202ENST00000352393 LILRA1O75019 489 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 NDUFA6P56556 154 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 SLC25A24Q6NUK1 477 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 FAM58AQ8N1B3 248 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 IER2Q9BTL4 223 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 RSG1Q9BU20 258 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 RPRMQ9NS64 109 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 DLL3Q9NYJ7 618 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 TINAGQ9UJW2 476 aa20.85■□□□□ 0.93
CPNE1-202ENST00000352393 OR5B21A6NL26 309 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 IGLV2-14P01704 120 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 BCL2P10415 239 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 DCAF12Q5T6F0 453 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 TIPARPQ7Z3E1 657 aaKnown RBP20.84■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF573Q86YE8 665 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 OR2M7Q8NG81 312 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 OR10V1Q8NGI7 309 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 OR1A1Q9P1Q5 309 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 CACNG5Q9UF02 275 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 TNRC18O15417 2968 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-202ENST00000352393 LRP5LA4QPB2 252 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 TDGF1P13385 188 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 ARR3P36575 388 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 TCEAL6Q6IPX3 200 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 C17orf78Q8N4C9 275 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF525Q8N782 197 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 FAM173AQ9BQD7 235 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 PSMG3Q9BT73 122 aaPredicted RBP20.84■□□□□ 0.93
CPNE1-202ENST00000352393 MPC1Q9Y5U8 109 aa20.84■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BKO60814 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 CER1O95813 267 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BJP06899 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BOP23527 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BBP33778 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 CD200P41217 278 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BDP58876 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BCP62807 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 GNG3P63215 75 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 ZNF726P1Q15940 193 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST2H2BEQ16778 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-202ENST00000352393 OR13D1Q8NGV5 346 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 RNASE11Q8TAA1 199 aaKnown RBP20.83■□□□□ 0.93
CPNE1-202ENST00000352393 MBD3L1Q8WWY6 194 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BHQ93079 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BNQ99877 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 HIST1H2BMQ99879 126 aa20.83■□□□□ 0.93
CPNE1-202ENST00000352393 ANKRD30BLA7E2S9 258 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 C3orf80F5H4A9 247 aa20.83■□□□□ 0.92
CPNE1-202ENST00000352393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms