RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CACNA1AO00555 2505 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 KCNAB3O43448 404 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 CD37P11049 281 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 THBS3P49746 956 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
SMC6-201ENST00000351948 SPICQ8N5J4 248 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 GPR137Q96N19 417 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 VSIG4Q9Y279 399 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 TCTE3Q8IZS6 198 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 OR2C3Q8N628 320 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
SMC6-201ENST00000351948 DVL1O14640 695 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 DVL1P1P54792 670 aaPredicted RBP11.78□□□□□ -0.52
SMC6-201ENST00000351948 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 NECAP1Q8NC96 275 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 HEXA-AS1Q9H8Q6 139 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 CHST1O43916 411 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 MPV17P39210 176 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 ATP5J2P56134 94 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 ASCL5Q7RTU5 278 aa11.78□□□□□ -0.52
SMC6-201ENST00000351948 RGP1Q92546 391 aaPredicted RBP11.78□□□□□ -0.52
SMC6-201ENST00000351948 MGST3O14880 152 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 BSPH1Q075Z2 132 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 FOXF2Q12947 444 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 CD200R1LQ6Q8B3 271 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 HABP2Q14520 560 aaPredicted RBP11.77□□□□□ -0.52
SMC6-201ENST00000351948 MMDQ15546 238 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 HSD17B10Q99714 261 aaKnown RBP11.77□□□□□ -0.52
SMC6-201ENST00000351948 DLL3Q9NYJ7 618 aa11.77□□□□□ -0.52
SMC6-201ENST00000351948 NPIPB13A6NJU9 1138 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 NPIPB4C9JG80 1138 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 RHBDL1O75783 438 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 LYPD3O95274 346 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 TAS2R45P59539 299 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
SMC6-201ENST00000351948 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 FBXL17Q9UF56 701 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 BPIFB3P59826 476 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 ARF6P62330 175 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 OR5M8Q8NGP6 311 aa11.77□□□□□ -0.53
SMC6-201ENST00000351948 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 CD1AP06126 327 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 FGF2P09038 288 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 GLIPR1P48060 266 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 SEZ6L2Q6UXD5 910 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 ZNF714Q96N38 554 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
SMC6-201ENST00000351948 SYNGR3O43761 229 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 CSN1S1P47710 185 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 ZFP82Q8N141 532 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 ZNF485Q8NCK3 441 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 SLC25A22Q9H936 323 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 K7EQM0 130 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 TXNL1O43396 289 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 CD40P25942 277 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 HIST2H3AQ71DI3 136 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
SMC6-201ENST00000351948 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
SMC6-201ENST00000351948 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 COA4Q9NYJ1 87 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 CLPSP04118 112 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 RAG2P55895 527 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 TECTAO75443 2155 aa11.76□□□□□ -0.53
SMC6-201ENST00000351948 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
SMC6-201ENST00000351948 ORM2P19652 201 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 VDAC1P21796 283 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 BRS3P32247 399 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 TMEM33P57088 247 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 C1orf100Q5SVJ3 147 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
SMC6-201ENST00000351948 OR2T6Q8NHC8 308 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 SYNGR2O43760 224 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 SMPD2O60906 423 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 NPIPB7O75200 414 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 F2RP25116 425 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 USF2Q15853 346 aaPredicted RBP11.75□□□□□ -0.53
SMC6-201ENST00000351948 SLC25A53Q5H9E4 307 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 BCL2L2Q92843 193 aaPredicted RBP11.75□□□□□ -0.53
SMC6-201ENST00000351948 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms