RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SCARF2Q96GP6 870 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-201ENST00000351677 PARP11Q9NR21 331 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-201ENST00000351677 SIGLEC5O15389 551 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 ISG15P05161 165 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 CLEC5AQ9NY25 188 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 PIKFYVEQ9Y2I7 2098 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 AP4M1O00189 453 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 OR2T10Q8NGZ9 312 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 Q9N2K0 584 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 TECRQ9NZ01 308 aaKnown RBP13.9□□□□□ -0.18
PTPN11-201ENST00000351677 H3BQ15 152 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 SCTP09683 121 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 DNAJC13O75165 2243 aa13.9□□□□□ -0.18
PTPN11-201ENST00000351677 M0QZ24 198 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 RAB1CQ92928 201 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 FAM206AQ9NX38 181 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 BRCA1P38398 1863 aaKnown RBP13.89□□□□□ -0.19
PTPN11-201ENST00000351677 SMIM17P0DL12 118 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 CRYBA2P53672 197 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 GOLT1BQ9Y3E0 138 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 HS3ST3B1Q9Y662 390 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 HNRNPA3P51991 378 aaKnown RBP13.89□□□□□ -0.19
PTPN11-201ENST00000351677 PTTG1IPP53801 180 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 RUNX1Q01196 453 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 CEBPEQ15744 281 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 LINC01590Q5TEZ4 76 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 PDPNQ86YL7 162 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 FGF5P12034 268 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 CEACAM3P40198 252 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 AURKAIP1Q9NWT8 199 aaPredicted RBP13.89□□□□□ -0.19
PTPN11-201ENST00000351677 SEC11BP0C7V7 166 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 SAP25Q8TEE9 199 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 TMEM167BQ9NRX6 74 aa13.89□□□□□ -0.19
PTPN11-201ENST00000351677 CASP8AP2Q9UKL3 1982 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 CA11O75493 328 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 RANP62826 216 aaKnown RBP13.88□□□□□ -0.19
PTPN11-201ENST00000351677 SLC35E3Q7Z769 313 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 OR52L2PQ8NGH6 319 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 HARBI1Q96MB7 349 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 MFNGO00587 321 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 GOSR1O95249 250 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 REG1BP48304 166 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 EGR4Q05215 589 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 TUSC1Q2TAM9 212 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 TMEM255AQ5JRV8 349 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 SYNGR1O43759 233 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 HTR1DP28221 377 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 FGF12P61328 243 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 C1orf100Q5SVJ3 147 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 MEOX2P50222 304 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 UNQ9370/PRO34162Q6UXP9 181 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 OR10G8Q8NGN5 311 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 AQP3Q92482 292 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 OPN3Q9H1Y3 402 aaPredicted RBP13.88□□□□□ -0.19
PTPN11-201ENST00000351677 GPR132Q9UNW8 380 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 RNF24Q9Y225 148 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 PRDX2P32119 198 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 RTP5Q14D33 572 aa13.88□□□□□ -0.19
PTPN11-201ENST00000351677 TEX30Q5JUR7 227 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 TGIF2LYQ8IUE0 185 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 ADAMTS17Q8TE56 1095 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 SNX22Q96L94 193 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 GPHA2Q96T91 129 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 NAGKQ9UJ70 344 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 WIPI2Q9Y4P8 454 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 YTHDF2Q9Y5A9 579 aaKnown RBP13.87□□□□□ -0.19
PTPN11-201ENST00000351677 TIAF1O95411 115 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 G0S2P27469 103 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 UCP2P55851 309 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 OR8B3Q8NGG8 313 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 OR8B2Q96RD0 313 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 G6PC2Q9NQR9 355 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 PITX3O75364 302 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 THYN1Q9P016 225 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 CACNA1IQ9P0X4 2223 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 CLDN14O95500 239 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 CRYBA1P05813 215 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 IFI6P09912 130 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 TMEM65Q6PI78 240 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 ZBTB34Q8NCN2 500 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 FLYWCH2Q96CP2 140 aaKnown RBP13.87□□□□□ -0.19
PTPN11-201ENST00000351677 DEDDO75618 318 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 NMBP08949 121 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 OR4A8P0C604 315 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 B2MP61769 119 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 ZNF660Q6AZW8 331 aaPredicted RBP13.87□□□□□ -0.19
PTPN11-201ENST00000351677 SRXN1Q9BYN0 137 aa13.87□□□□□ -0.19
PTPN11-201ENST00000351677 TRAV34A0A0B4J273 112 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
PTPN11-201ENST00000351677 CFDP00746 253 aaPredicted RBP13.86□□□□□ -0.19
PTPN11-201ENST00000351677 CD82P27701 267 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 PILRBQ9UKJ0 227 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 NKX2-8O15522 239 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 MRGPRGQ86SM5 289 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 PRSS3P2Q8NHM4 247 aa13.86□□□□□ -0.19
PTPN11-201ENST00000351677 TMEM204Q9BSN7 226 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms