RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LIPFP07098 398 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 CD37P11049 281 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 LIMK1P53667 647 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 UCP2P55851 309 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 KIAA0141Q14154 515 aaPredicted RBP9.46□□□□□ -0.9
CLCN6-202ENST00000346436 TBR1Q16650 682 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 OR5AP2Q8NGF4 316 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 SH3BGRL3Q9H299 93 aa9.46□□□□□ -0.9
CLCN6-202ENST00000346436 CDIPTO14735 213 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF239Q16600 458 aaKnown RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 OR52M1Q8NGK5 317 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 MTCL1Q9Y4B5 1905 aaKnown RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 TAAR5O14804 337 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 RXFP4Q8TDU9 374 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 CTHRC1Q96CG8 243 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 DPH3Q96FX2 82 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 P2RX4Q99571 388 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 HDHD3Q9BSH5 251 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 PARP11Q9NR21 331 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 MRPL22Q9NWU5 206 aaKnown RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 CLEC18AA5D8T8 446 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 EFEMP2O95967 443 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 SCAND1P57086 179 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 TIMM23BQ5SRD1 257 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 C12orf54Q6X4T0 127 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 HSD17B13Q7Z5P4 300 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 CLEC18CQ8NCF0 446 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 SLC26A10Q8NG04 563 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 MITD1Q8WV92 249 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 NIPSNAP3BQ9BS92 247 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 WIPI2Q9Y4P8 454 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 POMT1Q9Y6A1 747 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 E5RGE8 158 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 WNT9BO14905 357 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 GAMTQ14353 236 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF660Q6AZW8 331 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 NLRC5Q86WI3 1866 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 CHRNA10Q9GZZ6 450 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 NSG2Q9Y328 171 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 TRBV5-5A0A0J9YX44 114 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 EGR4Q05215 589 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 RIPPLY2Q5TAB7 128 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 CDCP2Q5VXM1 449 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 OR5B3Q8NH48 314 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 LILRB1Q8NHL6 650 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-202ENST00000346436 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
CLCN6-202ENST00000346436 DBX1A6NMT0 343 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 HTR1DP28221 377 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 RAB5CP51148 216 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 SNRPEP62304 92 aaKnown RBP9.44□□□□□ -0.9
CLCN6-202ENST00000346436 PCOLCEQ15113 449 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 ADIRFQ15847 76 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 GGNBP1Q5YKI7 109 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 STPG3Q8N7X2 389 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 OR2D2Q9H210 308 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 PPIAL4CA0A0B4J2A2 164 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 PPIAL4GP0DN37 164 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 RPS11P62280 158 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLCN6-202ENST00000346436 HMGN3Q15651 99 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 GCSAMQ8N6F7 178 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 LFNGQ8NES3 379 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 MSL2Q9HCI7 577 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 KCNK7Q9Y2U2 307 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 FAM186AA6NE01 2351 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 OR5AC1P0C628 307 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
CLCN6-202ENST00000346436 NQO2P16083 231 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 FAM162BQ5T6X4 162 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 HIST2H3AQ71DI3 136 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 CALHM1Q8IU99 346 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 SERTM2A0A1B0GWG4 89 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 MGST3O14880 152 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 TTRP02766 147 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 NHLH1Q02575 133 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 PJVKQ0ZLH3 352 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 TMEM30BQ3MIR4 351 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 CLEC5AQ9NY25 188 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 PRNDQ9UKY0 176 aa9.44□□□□□ -0.9
CLCN6-202ENST00000346436 RCC1P18754 421 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-202ENST00000346436 PPP1CCP36873 323 aaKnown RBP9.43□□□□□ -0.9
CLCN6-202ENST00000346436 GALR1P47211 349 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 OR2V2Q96R30 315 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 RSPO3Q9BXY4 272 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-202ENST00000346436 PLXNA3P51805 1871 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 HEATR5BQ9P2D3 2071 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 SLC25A6P12236 298 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 NAT1P18440 290 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 MPV17LQ2QL34 196 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 DDB2Q92466 427 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 MMP26Q9NRE1 261 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 TP53BP1Q12888 1972 aaPredicted RBP9.43□□□□□ -0.9
CLCN6-202ENST00000346436 IGHV3-43A0A0B4J1X8 118 aa9.43□□□□□ -0.9
CLCN6-202ENST00000346436 A0A0J9YW62 118 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms