RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CFDP00746 253 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-201ENST00000345617 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
HDAC4-201ENST00000345617 C17orf47Q8NEP4 570 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 HSPB9Q9BQS6 159 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 CXXC4Q9H2H0 198 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 MFAP2P55001 183 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 EWSR1Q01844 656 aaKnown RBP eCLIP17.09■□□□□ 0.334e-6■■■□□ 15
HDAC4-201ENST00000345617 GPA33Q99795 319 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 RCC2Q9P258 522 aaKnown RBP17.09■□□□□ 0.33
HDAC4-201ENST00000345617 LMO7DNF2Z398 122 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 TRMT61AQ96FX7 289 aaKnown RBP17.08■□□□□ 0.33
HDAC4-201ENST00000345617 ADAMTSL3P82987 1691 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 COL9A2Q14055 689 aaPredicted RBP17.08■□□□□ 0.33
HDAC4-201ENST00000345617 RLN3Q8WXF3 142 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 ASB10Q8WXI3 467 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 SIRT5Q9NXA8 310 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 TCF24Q7RTU0 167 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 ZMIZ1Q9ULJ6 1067 aa17.08■□□□□ 0.33
HDAC4-201ENST00000345617 SPATA46Q5T0L3 261 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 LEPROTL1O95214 131 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 PPP1CCP36873 323 aaKnown RBP17.08■□□□□ 0.32
HDAC4-201ENST00000345617 PRELID3AQ96N28 172 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 ASPDHA6ND91 283 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 LYZL6O75951 148 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 DEFB108BQ8NET1 73 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 IGLV3-16A0A075B6K0 115 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 TRAV38-1A0A0B4J264 116 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 CDX1P47902 265 aaPredicted RBP17.08■□□□□ 0.32
HDAC4-201ENST00000345617 VAX1Q5SQQ9 334 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 Q8WTZ3 238 aa17.08■□□□□ 0.32
HDAC4-201ENST00000345617 FCARP24071 287 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF273Q14593 569 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF880Q6PDB4 577 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 KLHDC9Q8NEP7 349 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 IGHV3-20A0A0C4DH32 117 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 ANKRD34AQ69YU3 496 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM108Q6UXF1 575 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TGIF2-C20orf24A0A0A6YYL0 155 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 OR8I2Q8N0Y5 310 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TNFRSF12AQ9NP84 129 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TSC2P49815 1807 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TCF23Q7RTU1 214 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 RNF122Q9H9V4 155 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 GZMHP20718 246 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF117Q03924 483 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 MS4A3Q96HJ5 214 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 A0A1B0GV90 55 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM210A6NLX4 147 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 MPTX1A8MV57 137 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 SLC17A3O00476 420 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 STPG3Q8N7X2 389 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM45BQ96B21 275 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 NRIP2Q9BQI9 281 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 NPTNQ9Y639 398 aa17.07■□□□□ 0.32
HDAC4-201ENST00000345617 CA6P23280 308 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 EPHA8P29322 1005 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-201ENST00000345617 FZD5Q13467 585 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 DAOP14920 347 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 TAS2R60P59551 318 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 SOD3P08294 240 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 RPS27P42677 84 aaKnown RBP17.06■□□□□ 0.32
HDAC4-201ENST00000345617 RAB1BQ9H0U4 201 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 C11orf68Q9H3H3 251 aaKnown RBP17.06■□□□□ 0.32
HDAC4-201ENST00000345617 ATP5IP56385 69 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-201ENST00000345617 SPANXN1Q5VSR9 72 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 LSM10Q969L4 123 aaKnown RBP17.06■□□□□ 0.32
HDAC4-201ENST00000345617 ASB16Q96NS5 453 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 CXCL13O43927 109 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 IGF2P01344 180 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 PPP2CBP62714 309 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 DEFB103AP81534 67 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 IGHV3-15A0A0B4J1V0 119 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM50BP56557 158 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 A0A0B4J293 547 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 H0Y980 276 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 RND1Q92730 232 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 MED12LQ86YW9 2145 aa17.06■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF774Q6NX45 483 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 CD300CQ08708 224 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 LY75O60449 1722 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 LRRC75AQ8NAA5 344 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 SF3B5Q9BWJ5 86 aaKnown RBP17.05■□□□□ 0.32
HDAC4-201ENST00000345617 MOB4Q9Y3A3 225 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 TNRC6AQ8NDV7 1962 aaKnown RBP17.05■□□□□ 0.32
HDAC4-201ENST00000345617 CCDC144NLQ6NUI1 221 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 OR1L8Q8NGR8 309 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 TM4SF19Q96DZ7 209 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 LRP5O75197 1615 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 IBA57Q5T440 356 aaKnown RBP17.05■□□□□ 0.32
HDAC4-201ENST00000345617 IL4P05112 153 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 EMP1P54849 157 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 NKG7Q16617 165 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 ZDHHC8Q9ULC8 765 aa17.05■□□□□ 0.32
HDAC4-201ENST00000345617 LPAL2Q16609 132 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 OR8B3Q8NGG8 313 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 LCTP09848 1927 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 SBK3P0C264 359 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 SMIM13P0DJ93 91 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms