RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 TMEM104Q8NE00 496 aa13.46□□□□□ -0.25
CD55-202ENST00000343420 UBALD1Q8TB05 177 aa13.46□□□□□ -0.25
CD55-202ENST00000343420 Q96M66 194 aa13.46□□□□□ -0.25
CD55-202ENST00000343420 RAB9BQ9NP90 201 aa13.46□□□□□ -0.25
CD55-202ENST00000343420 TRAPPC2LQ9UL33 140 aa13.46□□□□□ -0.25
CD55-202ENST00000343420 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 H0YHG0 523 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 CCRL2O00421 344 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 SPINT2O43291 252 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 SC5DO75845 299 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 GAPDHP04406 335 aaKnown RBP13.45□□□□□ -0.26
CD55-202ENST00000343420 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 FUT3P21217 361 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 GP2P55259 537 aaKnown RBP13.45□□□□□ -0.26
CD55-202ENST00000343420 GPR50Q13585 617 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 INSL4Q14641 139 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 BEAN1Q3B7T3 259 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 TMEM30BQ3MIR4 351 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 SAMD5Q5TGI4 173 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 TRAT1Q6PIZ9 186 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 NRG4Q8WWG1 115 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 TMED9Q9BVK6 235 aa13.45□□□□□ -0.26
CD55-202ENST00000343420 IGHV1-3A0A0C4DH29 117 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 FGF16O43320 207 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 IGKV1D-33P01593 117 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 IGKV1-33P01594 117 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 UBBP0CG47 229 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 IL3RAP26951 378 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 SLC35A2P78381 396 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 IRF3Q14653 427 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 MED22Q15528 200 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 TCTEX1D4Q5JR98 221 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 KPRPQ5T749 579 aaPredicted RBP13.44□□□□□ -0.26
CD55-202ENST00000343420 GLT8D1Q68CQ7 371 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 OR4X2Q8NGF9 303 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 OR4K15Q8NH41 348 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 PHYHIPQ92561 330 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 CST11Q9H112 138 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 TPRKBQ9Y3C4 175 aa13.44□□□□□ -0.26
CD55-202ENST00000343420 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
CD55-202ENST00000343420 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 TCRBV4S1A1TA0A5B7 111 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 UBE2QL1A1L167 161 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 PDCD6O75340 191 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 HBZP02008 142 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 VHLP40337 213 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 REG1BP48304 166 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 EBI3Q14213 229 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 HNF4GQ14541 408 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
CD55-202ENST00000343420 FAM27D1Q5T7N8 215 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 FAM53AQ6NSI3 398 aaPredicted RBP13.43□□□□□ -0.26
CD55-202ENST00000343420 MOB3BQ86TA1 216 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 LRRTM1Q86UE6 522 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 C5orf56Q8N8D9 126 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 SGCDQ92629 289 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 ST6GALNAC6Q969X2 333 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 FAM46BQ96A09 425 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 GNG12Q9UBI6 72 aa13.43□□□□□ -0.26
CD55-202ENST00000343420 MPIG6BO95866 241 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 RCC1P18754 421 aaPredicted RBP13.42□□□□□ -0.26
CD55-202ENST00000343420 SRMP19623 302 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 MYF6P23409 242 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 C1orf100Q5SVJ3 147 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
CD55-202ENST00000343420 CEACAM19Q7Z692 300 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 IZUMO1Q8IYV9 350 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 PRR18Q8N4B5 295 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 OR1L1Q8NH94 360 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 RTN4IP1Q8WWV3 396 aaPredicted RBP13.42□□□□□ -0.26
CD55-202ENST00000343420 UFD1Q92890 307 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 DUSP21Q9H596 190 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
CD55-202ENST00000343420 PSMB11A5LHX3 300 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 SLC31A2O15432 143 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 VSIG8P0DPA2 414 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 ZNF137PP52743 207 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 LIPKQ5VXJ0 399 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 ZNF554Q86TJ5 538 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 ZNF439Q8NDP4 499 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 EAF1Q96JC9 268 aaPredicted RBP13.41□□□□□ -0.26
CD55-202ENST00000343420 ANKRD60Q9BZ19 345 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 TAF9BQ9HBM6 251 aa13.41□□□□□ -0.26
CD55-202ENST00000343420 MBNL3Q9NUK0 354 aaKnown RBP13.41□□□□□ -0.26
CD55-202ENST00000343420 IGHV3-72A0A0B4J1Y9 119 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 TXNL1O43396 289 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 RGS10O43665 173 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 UCHL1P09936 223 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 PF4V1P10720 104 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 CD37P11049 281 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 CD1BP29016 333 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 ZNF134P52741 427 aa13.4□□□□□ -0.26
CD55-202ENST00000343420 OXLD1Q5BKU9 147 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms