RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 VAMP5O95183 116 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 CTXN2P0C2S0 81 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 JMJD7P0C870 316 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 F2RP25116 425 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ARL4DP49703 201 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 IDH3GP51553 393 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 CNN1P51911 297 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 GNB2P62879 340 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 CFHR1Q03591 330 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 DLX2Q07687 328 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 BTNL3Q6UXE8 466 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 SHISA6Q6ZSJ9 500 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF573Q86YE8 665 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 NECAP1Q8NC96 275 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 OR2T10Q8NGZ9 312 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 OR1F12Q8NHA8 337 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF501Q96CX3 271 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
HOXA1-201ENST00000343060 CCL28Q9NRJ3 127 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1-6A0A0C4DH72 117 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CCDC85CA6NKD9 419 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 SLC33A1O00400 549 aaPredicted RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 OR7C1O76099 320 aaPredicted RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 VENTXO95231 258 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 MBP02144 154 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CA3P07451 260 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CST2P09228 141 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 SCTP09683 121 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 TUBG1P23258 451 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM208Q9BTX3 173 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 PARLQ9H300 379 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 NAGKQ9UJ70 344 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 TRANK1O15050 2925 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CHD3Q12873 2000 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 IGHV1OR21-1A0A087WYE8 117 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 KIR2DS1A0A191URI9 304 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 RPLP1P05386 114 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 OR10J1P30954 320 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 KIR2DS4P43632 304 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 LBX1P52954 281 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CLDN15P56746 228 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 HBG1P69891 147 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 HBG2P69892 147 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 KIR2DS1Q14954 304 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 PDCD1Q15116 288 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM37Q8WXS4 190 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 GPHA2Q96T91 129 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 C20orf144Q9BQM9 153 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 ULBP2Q9BZM5 246 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 MANBALQ9NQG1 85 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 MRPS18CQ9Y3D5 142 aaKnown RBP8.26□□□□□ -1.09
HOXA1-201ENST00000343060 CBY1Q9Y3M2 126 aa8.26□□□□□ -1.09
HOXA1-201ENST00000343060 A0A1W2PR77 199 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 SYNGR2O43760 224 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1D-33P01593 117 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1-33P01594 117 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 RPS18P62269 152 aaKnown RBP8.25□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM144Q7Z5S9 345 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 KMT5CQ86Y97 462 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 RPP25LQ8N5L8 163 aaKnown RBP8.25□□□□□ -1.09
HOXA1-201ENST00000343060 ZIC4Q8N9L1 334 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 LHX4Q969G2 390 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 BTF3L4Q96K17 158 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PLK3Q9H4B4 646 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 ATP23Q9Y6H3 246 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 KIAA1549Q9HCM3 1950 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 TRBV6-6A0A0A6YYG2 114 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF816-ZNF321PA0A0X1KG74 233 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 NPIPA2E9PIF3 369 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 LMO7DNF2Z398 122 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 TP53I11O14683 189 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 MLNRO43193 412 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 YPEL1O60688 119 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 GYPAP02724 150 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 LCATP04180 440 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 CD99P14209 185 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PSMB3P49720 205 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 UBE2NP61088 152 aaKnown RBP8.25□□□□□ -1.09
HOXA1-201ENST00000343060 RTP5Q14D33 572 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PLCXD3Q63HM9 321 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF774Q6NX45 483 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PCSK4Q6UW60 755 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 Q6ZRM9 215 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 CALHM1Q8IU99 346 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PLXDC1Q8IUK5 500 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 SAXO1Q8IYX7 474 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF611Q8N823 705 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 TAF15Q92804 592 aaKnown RBP eCLIP8.25□□□□□ -1.09
HOXA1-201ENST00000343060 RPUSD4Q96CM3 377 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms