RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ZNF737O75373 536 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 HEXAP06865 529 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 LYL1P12980 280 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 CHRNB4P30926 498 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 CD80P33681 288 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 MEX3BQ6ZN04 569 aaKnown RBP16.74■□□□□ 0.27
RTN1-202ENST00000342503 CMTM1Q8IZ96 169 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 OR8H3Q8N146 312 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 TPRX1Q8N7U7 411 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 INO80EQ8NBZ0 244 aaPredicted RBP16.74■□□□□ 0.27
RTN1-202ENST00000342503 TMEM222Q9H0R3 208 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 OR5AC2Q9NZP5 309 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 RNF7Q9UBF6 113 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 UBE2J1Q9Y385 318 aaPredicted RBP16.74■□□□□ 0.27
RTN1-202ENST00000342503 NKX2-6A6NCS4 301 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 TNFSF12O43508 249 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 PGLYRP1O75594 196 aaPredicted RBP16.73■□□□□ 0.27
RTN1-202ENST00000342503 CEACAM6P40199 344 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 LUMP51884 338 aaPredicted RBP16.73■□□□□ 0.27
RTN1-202ENST00000342503 S100A10P60903 97 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 NCMAPQ5T1S8 102 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 BVESQ8NE79 360 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 MRGPRDQ8TDS7 321 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 SFTPCP11686 197 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 SRPXP78539 464 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 ADORA2A-AS1P86434 159 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 FBXL19-AS1Q494R0 122 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 FAM201AQ5SY85 155 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 TMEM268Q5VZI3 342 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 LILRB1Q8NHL6 650 aaPredicted RBP16.73■□□□□ 0.27
RTN1-202ENST00000342503 SNX22Q96L94 193 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 PARP12Q9H0J9 701 aaKnown RBP16.73■□□□□ 0.27
RTN1-202ENST00000342503 DNTTIP1Q9H147 329 aa16.73■□□□□ 0.27
RTN1-202ENST00000342503 ESRP2Q9H6T0 727 aaKnown RBP16.73■□□□□ 0.27
RTN1-202ENST00000342503 RAI1Q7Z5J4 1906 aaPredicted RBP16.72■□□□□ 0.27
RTN1-202ENST00000342503 DYSFO75923 2080 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 KANTRA0A1W2PQU2 76 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 SHISA9B4DS77 424 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 BCL2L11O43521 198 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 CYB5R3P00387 301 aaPredicted RBP16.72■□□□□ 0.27
RTN1-202ENST00000342503 HBZP02008 142 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 PAX5Q02548 391 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 EDDM3AQ14507 147 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 C6orf183Q5T699 404 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 SLC51BQ86UW2 128 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 DMRTC2Q8IXT2 367 aaPredicted RBP16.72■□□□□ 0.27
RTN1-202ENST00000342503 SLC35G3Q8N808 338 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 OR13A1Q8NGR1 328 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 Q8TCH9 128 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 FAM222BQ8WU58 562 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 RNASE6Q93091 150 aaKnown RBP16.72■□□□□ 0.27
RTN1-202ENST00000342503 GALMQ96C23 342 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 TMEM56Q96MV1 263 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 COQ3Q9NZJ6 369 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 TMEM56-RWDD3S4R434 201 aa16.72■□□□□ 0.27
RTN1-202ENST00000342503 C17orf100A8MU93 164 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 IGLV2-14P01704 120 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 PET100P0DJ07 73 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 IL2RGP31785 369 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 FOXRED2Q8IWF2 684 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 SELENOHQ8IZQ5 122 aaKnown RBP16.71■□□□□ 0.27
RTN1-202ENST00000342503 OR52L2PQ8NGH6 319 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 OR1S1Q8NH92 325 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 ERGIC1Q969X5 290 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 RRNAD1Q96FB5 475 aaKnown RBP16.71■□□□□ 0.27
RTN1-202ENST00000342503 LURAP1Q96LR2 239 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 DIRC2Q96SL1 478 aa16.71■□□□□ 0.27
RTN1-202ENST00000342503 VSTM5A8MXK1 200 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 ADH4P08319 380 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 S100GP29377 79 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 ZNF695Q8IW36 515 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 ANGPTL6Q8NI99 470 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 PPP1R35Q8TAP8 253 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 LINC01560Q8TB33 94 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 NEUROG1Q92886 237 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 DCTN5Q9BTE1 182 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 TMED3Q9Y3Q3 217 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 RBM7Q9Y580 266 aaKnown RBP16.7■□□□□ 0.26
RTN1-202ENST00000342503 ICE1Q9Y2F5 2266 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 CACNA1DQ01668 2161 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 E7EQL1 145 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 H0Y980 276 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 MGST3O14880 152 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 B3GALNT1O75752 331 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 CD55P08174 381 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 OR8U9P0C7N5 309 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 UCP1P25874 307 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
RTN1-202ENST00000342503 FAM53AQ6NSI3 398 aaPredicted RBP16.7■□□□□ 0.26
RTN1-202ENST00000342503 TGIF2LYQ8IUE0 185 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 ZNRF1Q8ND25 227 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 OR8U1Q8NH10 309 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 PCNPQ8WW12 178 aaKnown RBP16.7■□□□□ 0.26
RTN1-202ENST00000342503 AKR1E2Q96JD6 320 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 KCNS2Q9ULS6 477 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms