RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 BVESQ8NE79 360 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 ZG16BQ96DA0 208 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 CHRNA10Q9GZZ6 450 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 ASB1Q9Y576 335 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 ZNF343Q6P1L6 599 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 COX6CP09669 75 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 MALP21145 153 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 PTBP1P26599 531 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDPK1-202ENST00000342085 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
PDPK1-202ENST00000342085 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 LDLRAD3Q86YD5 345 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 NFAM1Q8NET5 270 aaPredicted RBP12.65□□□□□ -0.38
PDPK1-202ENST00000342085 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
PDPK1-202ENST00000342085 DLX6P56179 175 aa12.65□□□□□ -0.39
PDPK1-202ENST00000342085 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.39
PDPK1-202ENST00000342085 LRP11Q86VZ4 500 aa12.65□□□□□ -0.39
PDPK1-202ENST00000342085 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.39
PDPK1-202ENST00000342085 STARD10Q9Y365 291 aa12.65□□□□□ -0.39
PDPK1-202ENST00000342085 ZNF638Q14966 1978 aaKnown RBP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TRGV2A0A075B6R0 118 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TLNRD1Q9H1K6 362 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 IFITM10A6NMD0 228 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 SRSF10O75494 262 aaKnown RBP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TRGV3P03979 118 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 ABHD14BQ96IU4 210 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 J3QT63 122 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TDGF1P13385 188 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 SLC25A1P53007 311 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 CX3CL1P78423 397 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 CBLN3Q6UW01 205 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 PAXXQ9BUH6 204 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 IGHV3-35A0A0C4DH35 117 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 ADRB1P08588 477 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 GABRB1P18505 474 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 CSF2RBP32927 897 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TMEM33P57088 247 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 KLF9Q13886 244 aaPredicted RBP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 SLC16A13Q7RTY0 426 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 TCTEX1D1Q8N7M0 179 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 RECKO95980 971 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 CISD3P0C7P0 127 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 C7orf69Q9H7B7 122 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 S1PR2O95136 353 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 CT62P0C5K7 136 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 UCP2P55851 309 aa12.64□□□□□ -0.39
PDPK1-202ENST00000342085 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
PDPK1-202ENST00000342085 SCN3AQ9NY46 2000 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 ISLRO14498 428 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 B4GALNT1Q00973 533 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 SLC52A3Q9NQ40 469 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 SOX21Q9Y651 276 aaPredicted RBP12.63□□□□□ -0.39
PDPK1-202ENST00000342085 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
PDPK1-202ENST00000342085 NMUP48645 174 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 FUNDC1Q8IVP5 155 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 TMEM251Q8N6I4 163 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
PDPK1-202ENST00000342085 B4E171 279 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 TSPAN7P41732 249 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 MFAP4P55083 255 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 PMS2P11Q13670 270 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 AMER3Q8N944 861 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
PDPK1-202ENST00000342085 P2RY6Q15077 328 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 CTF1Q16619 201 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 GUK1Q16774 197 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 PLCH1Q4KWH8 1693 aa12.63□□□□□ -0.39
PDPK1-202ENST00000342085 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 LY6DQ14210 128 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 SCN11AQ9UI33 1791 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 TMEM238LA0A1B0GVL6 79 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 A6NJY4 79 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
PDPK1-202ENST00000342085 GAPTQ8N292 157 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 OR2C3Q8N628 320 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 C3orf56Q8N813 242 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 WSB1Q9Y6I7 421 aa12.62□□□□□ -0.39
PDPK1-202ENST00000342085 IGHV3-66A0A0C4DH42 116 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms