RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MMP28Q9H239 520 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 PLGRKTQ9HBL7 147 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 V9GY05 133 aa12.37□□□□□ -0.43
VAPA-201ENST00000340541 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
VAPA-201ENST00000340541 H3BUI4 141 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 F2RL2O00254 374 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 ARSBP15848 533 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 RCC1P18754 421 aaPredicted RBP12.36□□□□□ -0.43
VAPA-201ENST00000340541 PRRX1P54821 245 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 OR10A3P58181 314 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 FBLN7Q53RD9 439 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 NKAPLQ5M9Q1 402 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 Q6ZPA2 131 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 C6orf201Q7Z4U5 140 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 NR2C2APQ86WQ0 139 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 FAM89BQ8N5H3 189 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 OR51D1Q8NGF3 324 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 OR52M1Q8NGK5 317 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 MRPL30Q8TCC3 161 aaKnown RBP12.36□□□□□ -0.43
VAPA-201ENST00000340541 ABCB10Q9NRK6 738 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 MBNL3Q9NUK0 354 aaKnown RBP12.36□□□□□ -0.43
VAPA-201ENST00000340541 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
VAPA-201ENST00000340541 WNK1Q9H4A3 2382 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 FGF9P31371 208 aaPredicted RBP12.35□□□□□ -0.43
VAPA-201ENST00000340541 PLA2G7Q13093 441 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 HES5Q5TA89 166 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 C22orf42Q6IC83 251 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 TMEM219Q86XT9 240 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 CREB3L1Q96BA8 519 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 FAAP24Q9BTP7 215 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
VAPA-201ENST00000340541 RAB18Q9NP72 206 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 TXNL4BQ9NX01 149 aaKnown RBP12.35□□□□□ -0.43
VAPA-201ENST00000340541 GFOD1Q9NXC2 390 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 NOTCH1P46531 2555 aa12.35□□□□□ -0.43
VAPA-201ENST00000340541 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 OOSP1A8MZH6 123 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
VAPA-201ENST00000340541 PDCD5O14737 125 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 SOCS1O15524 211 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 CD24P25063 80 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 BLVRBP30043 206 aaPredicted RBP12.34□□□□□ -0.43
VAPA-201ENST00000340541 CEACAM3P40198 252 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 KIR2DS4P43632 304 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 GNG10P50151 68 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 PSMD7P51665 324 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 STEAP1Q9UHE8 339 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 PITPNC1Q9UKF7 332 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 STUB1Q9UNE7 303 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
VAPA-201ENST00000340541 IGHV3-43A0A0B4J1X8 118 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 TMEM272A0A1B0GTI8 110 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 A0A1W2PPI3 338 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 IFITM5A6NNB3 132 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 NAPSAO96009 420 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 HBZP02008 142 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 IGHV3-43DP0DP04 118 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 MYL9P24844 172 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 EFNB2P52799 333 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 TMEM50BP56557 158 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 NEDD8Q15843 81 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
VAPA-201ENST00000340541 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 ZNF554Q86TJ5 538 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 LINC00311Q8N616 119 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 ZNF439Q8NDP4 499 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 OR4C13Q8NGP0 309 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
VAPA-201ENST00000340541 NPFFR1Q9GZQ6 430 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
VAPA-201ENST00000340541 AMMECR1Q9Y4X0 333 aaPredicted RBP12.33□□□□□ -0.44
VAPA-201ENST00000340541 FAM90A9PA6NNJ1 464 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 SLC31A2O15432 143 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 SPINT2O43291 252 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 RAB3BP20337 219 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 BRS3P32247 399 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 MADCAM1Q13477 382 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 Q3ZCU0 254 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 ZNF880Q6PDB4 577 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 Q8N2B8 174 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 CFHR4Q92496 578 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 OCSTAMPQ9BR26 566 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 HSF4Q9ULV5 492 aa12.32□□□□□ -0.44
VAPA-201ENST00000340541 A0A0B4J203 849 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 ZNF134P52741 427 aa12.31□□□□□ -0.44
VAPA-201ENST00000340541 HMGN3Q15651 99 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms