RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 NHLRC3Q5JS37 347 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 C9orf66Q5T8R8 295 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 OR2G6Q5TZ20 316 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF497Q6ZNH5 498 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 RNF152Q8N8N0 203 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 OR13C5Q8NGS8 318 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 OR8U1Q8NH10 309 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 APH1BQ8WW43 257 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 TMEM138Q9NPI0 162 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 IL36GQ9NZH8 169 aa12.77□□□□□ -0.37
H3F3C-201ENST00000340398 SORL1Q92673 2214 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 ORC5O43913 435 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 IGHG4P01861 327 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 CD2P06729 351 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 BDKRB2P30411 391 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 KLHL22Q53GT1 634 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 SYT6Q5T7P8 510 aaPredicted RBP12.76□□□□□ -0.37
H3F3C-201ENST00000340398 RPL22L1Q6P5R6 122 aaKnown RBP12.76□□□□□ -0.37
H3F3C-201ENST00000340398 C8orf31Q8N9H6 132 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 RITA1Q96K30 269 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 S100A13Q99584 98 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 KLK15Q9H2R5 256 aa12.76□□□□□ -0.37
H3F3C-201ENST00000340398 RPL36Q9Y3U8 105 aaKnown RBP12.76□□□□□ -0.37
H3F3C-201ENST00000340398 MAGEA13PA6NCF6 341 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 C12orf77C9JDV5 145 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 AIPO00170 330 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 SOX6P35712 828 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
H3F3C-201ENST00000340398 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 FAM71E2Q8N5Q1 922 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 OR1L1Q8NH94 360 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 KCTD7Q96MP8 289 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 FGF20Q9NP95 211 aaPredicted RBP12.75□□□□□ -0.37
H3F3C-201ENST00000340398 TRAPPC2LQ9UL33 140 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 WSB1Q9Y6I7 421 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 STAB2Q8WWQ8 2551 aa12.75□□□□□ -0.37
H3F3C-201ENST00000340398 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 LALBAP00709 142 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 GTF2F2P13984 249 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 IGFBP3P17936 291 aaPredicted RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 RCC1P18754 421 aaPredicted RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 VDAC1P21796 283 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 IL3RAP26951 378 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 PSMB8P28062 276 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 PPP3R1P63098 170 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 KIAA0141Q14154 515 aaPredicted RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
H3F3C-201ENST00000340398 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 GNG12Q9UBI6 72 aa12.74□□□□□ -0.37
H3F3C-201ENST00000340398 A0A1W2PPK0 400 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 G3V318 75 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 OGG1O15527 345 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 WBP4O75554 376 aaKnown RBP12.73□□□□□ -0.37
H3F3C-201ENST00000340398 HBZP02008 142 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 MYF6P23409 242 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 CNTFRP26992 372 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 ADARB1P78563 741 aaKnown RBP12.73□□□□□ -0.37
H3F3C-201ENST00000340398 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 ASPHD1Q5U4P2 390 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 LINC00596Q86U02 117 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 MUL1Q969V5 352 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 PAK1IP1Q9NWT1 392 aaPredicted RBP12.73□□□□□ -0.37
H3F3C-201ENST00000340398 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
H3F3C-201ENST00000340398 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 SPINT2O43291 252 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 IGF1P05019 195 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF137PP52743 207 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 RIPK1Q13546 671 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 FHL3Q13643 280 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 ZFP1Q6P2D0 407 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 ZFP41Q8N8Y5 198 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 OR1N2Q8NGR9 330 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 GHSRQ92847 366 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 C9orf16Q9BUW7 83 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 BANF2Q9H503 90 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 BABAM2Q9NXR7 383 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF107Q9UII5 783 aaPredicted RBP12.72□□□□□ -0.37
H3F3C-201ENST00000340398 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
H3F3C-201ENST00000340398 UBE2QL1A1L167 161 aa12.71□□□□□ -0.37
H3F3C-201ENST00000340398 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms