RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 GFI1Q99684 422 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 TMEM59Q9BXS4 323 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 ACOT13Q9NPJ3 140 aa11.7□□□□□ -0.54
ERCC1-203ENST00000340192 IGHV3-43A0A0B4J1X8 118 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 SPINT2O43291 252 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 DENRO43583 198 aaKnown RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 CA11O75493 328 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 BPNT1O95861 308 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 IGHV3-43DP0DP04 118 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 GABARAPL2P60520 117 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 QRFPP83859 136 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 EMX1Q04741 257 aaPredicted RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 UNC119Q13432 240 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 P2RY14Q15391 338 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 SSX1Q16384 188 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 NKAPLQ5M9Q1 402 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 C6orf183Q5T699 404 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 Q6ZTK2 550 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 C16orf82Q7Z2V1 217 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 PRR18Q8N4B5 295 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 NICN1Q9BSH3 213 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 SLC25A33Q9BSK2 321 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 Q9H521 79 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
ERCC1-203ENST00000340192 AK6Q9Y3D8 172 aaKnown RBP11.69□□□□□ -0.54
ERCC1-203ENST00000340192 A0A1W2PPI3 338 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 TMEM14DPA8MWL7 114 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 SLC17A2O00624 439 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 OR2F2O95006 317 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 HBZP02008 142 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 CHATP28329 748 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 C11orf44Q8N8P7 122 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 OR56B4Q8NH76 319 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 OR1L1Q8NH94 360 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 CAPSLQ8WWF8 208 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 CFHR4Q92496 578 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 AKR1E2Q96JD6 320 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 RBM14Q96PK6 669 aaKnown RBP11.68□□□□□ -0.54
ERCC1-203ENST00000340192 NEDD4LQ96PU5 975 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 PLGRKTQ9HBL7 147 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
ERCC1-203ENST00000340192 FAM90A9PA6NNJ1 464 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 HSD17B6O14756 317 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 MRPS14O60783 128 aaKnown RBP11.67□□□□□ -0.54
ERCC1-203ENST00000340192 TSPAN15O95858 294 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 FAM106CPP0CH98 169 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 ARSBP15848 533 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 RAB7AP51149 207 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 C6orf201Q7Z4U5 140 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 MRPL30Q8TCC3 161 aaKnown RBP11.67□□□□□ -0.54
ERCC1-203ENST00000340192 OCSTAMPQ9BR26 566 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 FAAP24Q9BTP7 215 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 TM2D1Q9BX74 207 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 MMP27Q9H306 513 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
ERCC1-203ENST00000340192 NDUFB11Q9NX14 153 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 GNG12Q9UBI6 72 aa11.67□□□□□ -0.54
ERCC1-203ENST00000340192 A0A0A6YYD4 124 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 CCRL2O00421 344 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 SLC31A2O15432 143 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 PEX14O75381 377 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 SNRNP70P08621 437 aaKnown RBP11.66□□□□□ -0.54
ERCC1-203ENST00000340192 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
ERCC1-203ENST00000340192 REG1BP48304 166 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
ERCC1-203ENST00000340192 RAB11BQ15907 218 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 TMEM30BQ3MIR4 351 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 Q3ZCU0 254 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 ABCA11PQ4W5N1 156 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 OR2W3Q7Z3T1 314 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 OR8H3Q8N146 312 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 SVOPQ8N4V2 548 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 KCNIP1Q9NZI2 227 aa11.66□□□□□ -0.54
ERCC1-203ENST00000340192 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 GAPDHP04406 335 aaKnown RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 AMY1AP04745 511 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 AMY2AP04746 511 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.54
ERCC1-203ENST00000340192 ZNF134P52741 427 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 CLDN12P56749 244 aa11.65□□□□□ -0.54
ERCC1-203ENST00000340192 HES1Q14469 280 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms