RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 SRSF3P84103 164 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PMP22Q01453 160 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FAM90A1Q86YD7 464 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 C11orf53Q8IXP5 236 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 C9orf106Q8NAJ2 232 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 GNPNAT1Q96EK6 184 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 NARS2Q96I59 477 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HRH4Q9H3N8 390 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 KPTNQ9Y664 436 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 WSB1Q9Y6I7 421 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ESPL1Q14674 2120 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HS3ST1O14792 307 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TNFSF13O75888 250 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HOXC12P31275 282 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 RDH5Q92781 318 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ZNF71Q9NQZ8 489 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 DKK4Q9UBT3 224 aa9.06□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FREM2Q5SZK8 3169 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 A0A1W2PR80 420 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TMEM30CPA0ZSE6 113 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 IGSF23A1L1A6 192 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 WT1P19544 449 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 VASH2Q86V25 355 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OR10Z1Q8NGY1 313 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ERRFI1Q9UJM3 462 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OTOGLQ3ZCN5 2332 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PROB1E7EW31 1015 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HSD17B6O14756 317 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TSPAN4O14817 238 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 MLNRO43193 412 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HSPA12AO43301 675 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 LYZL6O75951 148 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 NXPH2O95156 264 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HAND1O96004 215 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CTRB1P17538 263 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 NHLH2Q02577 135 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PEA15Q15121 130 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CTRB2Q6GPI1 263 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FAM122CQ6P4D5 195 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OOEPA6NGQ2 149 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 DFFBO76075 338 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PAX9P55771 341 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 POLR2GP62487 172 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SPATA46Q5T0L3 261 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 BEND4Q6ZU67 534 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 BATF2Q8N1L9 274 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 C19orf12Q9NSK7 152 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SSUH2Q9Y2M2 353 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SPAARA0A1B0GVQ0 90 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OR5H1A6NKK0 313 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FAM74A7A6NL05 159 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CDIPTO14735 213 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TXNL1O43396 289 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 VAMP2P63027 116 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ZNF718Q3SXZ3 478 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FAM74A3Q4VXF1 159 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 MIDNQ504T8 468 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 STARD4Q96DR4 205 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 LURAP1Q96LR2 239 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 COQ3Q9NZJ6 369 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TRAPPC2LQ9UL33 140 aa9.04□□□□□ -0.96
TRAF3IP2-201ENST00000340026 HSPB6O14558 160 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 WDR1O75083 606 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TSPAN15O95858 294 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SERPINE2P07093 398 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SFTA3P0C7M3 94 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CECR9P0C854 216 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 MPV17P39210 176 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 Q6ZS92 163 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 ZADH2Q8N4Q0 377 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TMEM171Q8WVE6 324 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 GPR146Q96CH1 333 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PBDC1Q9BVG4 233 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 SMIM3Q9BZL3 60 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OR1A1Q9P1Q5 309 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 PROCRQ9UNN8 238 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 WDFY4Q6ZS81 3184 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 FAM24AA6NFZ4 105 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 TMEM50AO95807 157 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 IGKV1-39P01597 117 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 IGKV1D-39P04432 117 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 OR8U9P0C7N5 309 aa9.03□□□□□ -0.96
TRAF3IP2-201ENST00000340026 P0C879 139 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms