RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 TBL2Q9Y4P3 447 aaKnown RBP10.43□□□□□ -0.74
SRSF3-201ENST00000339436 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 TRBV6-6A0A0A6YYG2 114 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 CLDN34H7C241 214 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 F2RL2O00254 374 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
SRSF3-201ENST00000339436 SCGNO76038 276 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 IGLV1-47P01700 117 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 LGALS4P56470 323 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 HMGN3Q15651 99 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 TMEM30BQ3MIR4 351 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 OLFML2AQ68BL7 652 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 ZNF880Q6PDB4 577 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 LHFPL4Q7Z7J7 247 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 BEND2Q8NDZ0 799 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 NDNFQ8TB73 568 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 ZNF596Q8TC21 504 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 SSMEM1Q8WWF3 244 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 DUX5Q96PT3 197 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 RIMS4Q9H426 269 aaPredicted RBP10.43□□□□□ -0.74
SRSF3-201ENST00000339436 ZMAT3Q9HA38 289 aaKnown RBP10.43□□□□□ -0.74
SRSF3-201ENST00000339436 TAF9BQ9HBM6 251 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 CHMP1AQ9HD42 196 aaPredicted RBP10.43□□□□□ -0.74
SRSF3-201ENST00000339436 SPATA2Q9UM82 520 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 TENM1Q9UKZ4 2725 aa10.43□□□□□ -0.74
SRSF3-201ENST00000339436 SERPINE3A8MV23 424 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 SDCBPO00560 298 aaPredicted RBP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 SPINT2O43291 252 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 HBZP02008 142 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 GNB3P16520 340 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 LOXL3P58215 753 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 UBA52P62987 128 aaKnown RBP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 SLC9A3R2Q15599 337 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 KRTAP24-1Q3LI83 254 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 MINOS1Q5TGZ0 78 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 CLVS1Q8IUQ0 354 aaPredicted RBP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 PRR18Q8N4B5 295 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 OR52M1Q8NGK5 317 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 OR1L1Q8NH94 360 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 RAB2BQ8WUD1 216 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 ZFAND2BQ8WV99 257 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 LEAP2Q969E1 77 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 CMSS1Q9BQ75 279 aaKnown RBP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 DCSTAMPQ9H295 470 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRSF3-201ENST00000339436 GFOD1Q9NXC2 390 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 KCNIP1Q9NZI2 227 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 MINOS1-NBL1R4GNA1 71 aa10.42□□□□□ -0.74
SRSF3-201ENST00000339436 A0A075B6Q4 140 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 HLA-DRB5Q30154 266 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 TMEM86BQ8N661 226 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 BCL7BQ9BQE9 202 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 POMT1Q9Y6A1 747 aa10.41□□□□□ -0.74
SRSF3-201ENST00000339436 IGHV3-43A0A0B4J1X8 118 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 TOR1AO14656 332 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 RNASE1P07998 156 aaKnown RBP10.4□□□□□ -0.74
SRSF3-201ENST00000339436 CD3GP09693 182 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 IGHV3-43DP0DP04 118 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 PAX6P26367 422 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 HTR1DP28221 377 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 IER3P46695 156 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 GNG10P50151 68 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 TMBIM6P55061 237 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 ARL6IP1Q15041 203 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 AANATQ16613 207 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 DYNAPQ8N1N2 210 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 SETD6Q8TBK2 473 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 MALSU1Q96EH3 234 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 MEGF9Q9H1U4 602 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 MMP28Q9H239 520 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 Q9N2K0 584 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 GNG12Q9UBI6 72 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 JPT1Q9UK76 154 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 MGAT4AQ9UM21 535 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 PSG11Q9UQ72 335 aa10.4□□□□□ -0.74
SRSF3-201ENST00000339436 A0A0A6YYH2 397 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 A6NJ64 397 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 VGLL3A8MV65 326 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 J3QR06 171 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 FCGR3AP08637 254 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 RORCP51449 518 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 PRRX1P54821 245 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 HLA-DRB3P79483 266 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 MRPS15P82914 257 aaKnown RBP10.39□□□□□ -0.75
SRSF3-201ENST00000339436 SSX2Q16385 188 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 LRRC75BQ2VPJ9 315 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 Q3ZCU0 254 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 FAM53AQ6NSI3 398 aaPredicted RBP10.39□□□□□ -0.75
SRSF3-201ENST00000339436 SAMD12Q8N8I0 201 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 C8orf31Q8N9H6 132 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 FAM216AQ8WUB2 273 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
SRSF3-201ENST00000339436 CREB3L1Q96BA8 519 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms