RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 HES4Q9HCC6 221 aa10.98□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZC4H2Q9NQZ6 224 aa10.98□□□□□ -0.65
CDK5RAP1-201ENST00000339269 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TRAV17A0A0B4J275 112 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TMEM238LA0A1B0GVL6 79 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 H0Y980 276 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 DEGS1O15121 323 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ADAM20O43506 726 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TNFSF12O43508 249 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CBR1P16152 277 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CAV2P51636 162 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 UBE2NP61088 152 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 EIF5AP63241 154 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 DEFA5Q01523 94 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF146Q15072 292 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ACSF3Q4G176 576 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SPIN3Q5JUX0 258 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SHEQ5VZ18 495 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 NARS2Q96I59 477 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 KIRREL1Q96J84 757 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TLNRD1Q9H1K6 362 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 UBE2J1Q9Y385 318 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 OR2W1Q9Y3N9 320 aa10.97□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SIRPB1O00241 398 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CDIPTO14735 213 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TSPAN4O14817 238 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TNFSF13O75888 250 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CGAP01215 116 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 IGKV1-39P01597 117 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 IGKV1D-39P04432 117 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 WNT2P09544 360 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SPP1P10451 314 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF44P15621 663 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 UCNP55089 124 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TMPRSS3P57727 454 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TGFBR3Q03167 851 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 DEFB109BQ30KR1 87 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 Q6ZR03 302 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CNEP1R1Q8N9A8 125 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF565Q8N9K5 539 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 OR5D13Q8NGL4 314 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 OR1J1Q8NGS3 322 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 KLF14Q8TD94 323 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SH3BGRL3Q9H299 93 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TREM2Q9NZC2 230 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TAAR3PQ9P1P4 343 aa10.96□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ATMQ13315 3056 aa10.96□□□□□ -0.66
CDK5RAP1-201ENST00000339269 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 KIAA1324LA8MWY0 1029 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 IGLV1-44P01699 117 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CD5P06127 495 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 OR8U9P0C7N5 309 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 GTF3C1Q12789 2109 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ANKRD39Q53RE8 183 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 OR8U1Q8NH10 309 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 UQCC1Q9NVA1 299 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 RNF115Q9Y4L5 304 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 RFNGQ9Y644 331 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 WNT9BO14905 357 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 PITX3O75364 302 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 F12P00748 615 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 DANCRP0C864 163 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 F2RP25116 425 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CEBPDP49716 269 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ASCL1P50553 236 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 PAX9P55771 341 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ID3Q02535 119 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 HMGN3Q15651 99 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 EIF5AL1Q6IS14 154 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 Q6ZRG5 221 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ZNF695Q8IW36 515 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 UBALD1Q8TB05 177 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 IL22RA2Q969J5 263 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ZFP57Q9NU63 452 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ERRFI1Q9UJM3 462 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 TINAGQ9UJW2 476 aa10.95□□□□□ -0.66
CDK5RAP1-201ENST00000339269 PSPNO60542 156 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 WDR1O75083 606 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 C1QL1O75973 258 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CECR9P0C854 216 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 SFTPCP11686 197 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 FHITP49789 147 aa10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 MRPL49Q13405 166 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ZNF169Q14929 603 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ZNF826PQ6ZT77 177 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms