RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TAF9Q16594 264 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 TMEM252Q8N6L7 170 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 LURAP1Q96LR2 239 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 TP53RKQ96S44 253 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 PLEKHF2Q9H8W4 249 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 GLRX2Q9NS18 164 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 TMEM242Q9NWH2 141 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 PPP1R14DQ9NXH3 145 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 SLC7A11Q9UPY5 501 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 PROB1E7EW31 1015 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 MRPL33O75394 65 aaKnown RBP16.09■□□□□ 0.17
PSPC1-201ENST00000338910 LCATP04180 440 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 NOVA1P51513 510 aaKnown RBP16.09■□□□□ 0.17
PSPC1-201ENST00000338910 RPL23AP62750 156 aaKnown RBP16.09■□□□□ 0.17
PSPC1-201ENST00000338910 BEND4Q6ZU67 534 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 MOB3AQ96BX8 217 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 LYRM2Q9NU23 88 aaPredicted RBP16.09■□□□□ 0.17
PSPC1-201ENST00000338910 PITPNC1Q9UKF7 332 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 CEP250Q9BV73 2442 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 A8MWP6 167 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 PGA5P0DJD9 388 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 UCP3P55916 312 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 JOSD1Q15040 202 aaPredicted RBP16.08■□□□□ 0.17
PSPC1-201ENST00000338910 C9orf135Q5VTT2 229 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 OR5C1Q8NGR4 320 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 SNX22Q96L94 193 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 NEU1Q99519 415 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 ASCL3Q9NQ33 180 aa16.08■□□□□ 0.17
PSPC1-201ENST00000338910 SP1P08047 785 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 EPHA1P21709 976 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 CD82P27701 267 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 NKX2-1P43699 371 aaPredicted RBP16.08■□□□□ 0.16
PSPC1-201ENST00000338910 RIPPLY2Q5TAB7 128 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 MEX3BQ6ZN04 569 aaKnown RBP16.08■□□□□ 0.16
PSPC1-201ENST00000338910 Q6ZSR3 168 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 TUSC5Q8IXB3 177 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 ODF3L1Q8IXM7 274 aa16.08■□□□□ 0.16
PSPC1-201ENST00000338910 GNPNAT1Q96EK6 184 aaPredicted RBP16.08■□□□□ 0.16
PSPC1-201ENST00000338910 CLDN34H7C241 214 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 FUT3P21217 361 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 CD200P41217 278 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 RUNX1Q01196 453 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 FAM90A2PQ658T7 463 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 DYRK2Q92630 601 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 CALHM2Q9HA72 323 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 A0A1B0GU03 582 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 LOC102723971A0A1B0GUV8 181 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 DVL1O14640 695 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 NKX2-8O15522 239 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 ANGPTL7O43827 346 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 HBE1P02100 147 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 GZMBP10144 247 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 CEACAM1P13688 526 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 MEOX1P50221 254 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 C3AR1Q16581 482 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 CCDC71LQ8N9Z2 235 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 RNASEH2CQ8TDP1 164 aaKnown RBP16.07■□□□□ 0.16
PSPC1-201ENST00000338910 OR2H1Q9GZK4 316 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 WNT5BQ9H1J7 359 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 GPR173Q9NS66 373 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 SLC7A10Q9NS82 523 aa16.07■□□□□ 0.16
PSPC1-201ENST00000338910 TRBV24-1A0A075B6N3 115 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 TRDCB7Z8K6 153 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 FGF7P21781 194 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 DYNLT3P51808 116 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 TLE4Q04727 773 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 P4HA3Q7Z4N8 544 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 METTL9Q9H1A3 318 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 CDH20Q9HBT6 801 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 FREM1Q5H8C1 2179 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 OR6C6A6NF89 314 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 GEMIN2O14893 280 aaKnown RBP16.06■□□□□ 0.16
PSPC1-201ENST00000338910 SSSCA1O60232 199 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 CYB5R3P00387 301 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-201ENST00000338910 MTCP1P56278 107 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 PNRC1Q12796 327 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-201ENST00000338910 TGIF2LXQ8IUE1 241 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM183AQ8IXX5 376 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 CMTM1Q8IZ96 169 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 MDS2Q8NDY4 140 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 C10orf35Q96D05 121 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 PRRG4Q9BZD6 226 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 CUL9Q8IWT3 2517 aa16.06■□□□□ 0.16
PSPC1-201ENST00000338910 C3orf85A0A1B0GTC6 90 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 SYNGR4O95473 234 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 RAB4BP61018 213 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 DPPA3Q6W0C5 159 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 C5orf24Q7Z6I8 188 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-201ENST00000338910 ZNF100Q8IYN0 542 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 NDUFAF3Q9BU61 184 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 TMEM222Q9H0R3 208 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 PTPRZ1P23471 2315 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-201ENST00000338910 A0A096LPE4 126 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 TRAV1-1A0A0B4J248 108 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 A0A1W2PPZ6 126 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 FAM221AA4D161 298 aa16.05■□□□□ 0.16
PSPC1-201ENST00000338910 CST7O76096 145 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms