RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 SPINK14Q6IE38 97 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
RERE-201ENST00000337907 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 MDP1Q86V88 176 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 NPFFO15130 113 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
RERE-201ENST00000337907 ST3GAL2Q16842 350 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 OR8D4Q8NGM9 314 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 GPA33Q99795 319 aa11.22□□□□□ -0.61
RERE-201ENST00000337907 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.61
RERE-201ENST00000337907 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 J3QR06 171 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 EML2O95834 649 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 RIMKLAQ8IXN7 391 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 KIF13BQ9NQT8 1826 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 KBTBD11O94819 623 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 ZNF137PP52743 207 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 MPV17LQ2QL34 196 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 UNQ9370/PRO34162Q6UXP9 181 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 SHISA5Q8N114 240 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 SCNM1Q9BWG6 230 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 USP54Q70EL1 1684 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 PRR35P0CG20 571 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.61
RERE-201ENST00000337907 NTMQ9P121 344 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.61
RERE-201ENST00000337907 APELAP0DMC3 54 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 PRDM7Q9NQW5 492 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 SMIM6P0DI80 62 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 DNAJB12Q9NXW2 375 aaKnown RBP11.21□□□□□ -0.62
RERE-201ENST00000337907 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 CCL21O00585 134 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 OR8B12Q8NGG6 310 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 RHNO1Q9BSD3 238 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 AKIP1Q9NQ31 210 aa11.21□□□□□ -0.62
RERE-201ENST00000337907 C16orf97H3BN30 126 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 NKX2-2O95096 273 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 NUBP1P53384 320 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 PRICKLE4Q2TBC4 344 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 CT55Q8WUE5 264 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 ORAI1Q96D31 301 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 CA11O75493 328 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 INO80CQ6PI98 192 aaPredicted RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 WNT16Q9UBV4 365 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 AWAT1Q58HT5 328 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 C12orf73Q69YU5 71 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 IFNL4K9M1U5 179 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 IGLV3-27P01718 113 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 MDC1Q14676 2089 aaKnown RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 IGKV3-15P01624 115 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 PF4P02776 101 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 ZNF25P17030 456 aaPredicted RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 GALNSP34059 522 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 PIKFYVEQ9Y2I7 2098 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 FGF9P31371 208 aaPredicted RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 LSM10Q969L4 123 aaKnown RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 DUX5Q96PT3 197 aa11.2□□□□□ -0.62
RERE-201ENST00000337907 ZNF107Q9UII5 783 aaPredicted RBP11.2□□□□□ -0.62
RERE-201ENST00000337907 MEX3AA1L020 520 aaKnown RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 FAM109BQ6ICB4 259 aaPredicted RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 OR2A4O95047 310 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 PRDX2P32119 198 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 MBD3L1Q8WWY6 194 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 OR2A7Q96R45 310 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 KCNE1BA0A087WTH5 132 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 PITX3O75364 302 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 NUBPLQ8TB37 319 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 CLPPQ16740 277 aaPredicted RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 ZFPL1O95159 310 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 ETHE1O95571 254 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 MYF5P13349 255 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 GAPTQ8N292 157 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 MC5RP33032 325 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 AESQ08117 197 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 KIR2DL4Q99706 377 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 LHX9Q9NQ69 397 aa11.19□□□□□ -0.62
RERE-201ENST00000337907 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
RERE-201ENST00000337907 MYO5AQ9Y4I1 1855 aaKnown RBP11.18□□□□□ -0.62
RERE-201ENST00000337907 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms