RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SMIM19Q96E16 107 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 MRPS24Q96EL2 167 aaKnown RBP8.43□□□□□ -1.06
CAPN3-202ENST00000337571 TMEM80Q96HE8 168 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 EAF1Q96JC9 268 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-202ENST00000337571 RASL11BQ9BPW5 248 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 DIMT1Q9UNQ2 313 aaKnown RBP8.43□□□□□ -1.06
CAPN3-202ENST00000337571 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
CAPN3-202ENST00000337571 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 IGHV3-72A0A0B4J1Y9 119 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 C15orf65H3BRN8 121 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 TXNL1O43396 289 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 WBP4O75554 376 aaKnown RBP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 MOSP00540 346 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 CD1BP29016 333 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 GP2P55259 537 aaKnown RBP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 RAB25P57735 213 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 KRTAP10-11P60412 298 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 CD69Q07108 199 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 DCTN2Q13561 401 aaKnown RBP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 EBI3Q14213 229 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 PNLIPRP3Q17RR3 467 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 Q499Y3 187 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 C6orf183Q5T699 404 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 TTC23Q5W5X9 447 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 XAF1Q6GPH4 301 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF497Q6ZNH5 498 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 STPG2Q8N412 459 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 JAGN1Q8N5M9 183 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 LINC00311Q8N616 119 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 UBALD1Q8TB05 177 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 CYGBQ8WWM9 190 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 LIN7CQ9NUP9 197 aaKnown RBP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 GFOD1Q9NXC2 390 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 GNG12Q9UBI6 72 aa8.42□□□□□ -1.06
CAPN3-202ENST00000337571 MRPS28Q9Y2Q9 187 aaKnown RBP8.42□□□□□ -1.06
CAPN3-202ENST00000337571 IGHV3-43A0A0B4J1X8 118 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 WI2-2373I1.2A0A1W2PRP0 233 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 H0YHG0 523 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 GPX5O75715 221 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 IGHV3-43DP0DP04 118 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 IGFBP3P17936 291 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-202ENST00000337571 EGFEM1PQ0D2K5 195 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 TMEM30BQ3MIR4 351 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 Q3ZCU0 254 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 CXorf66Q5JRM2 361 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-202ENST00000337571 SYT6Q5T7P8 510 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-202ENST00000337571 AWAT2Q6E213 333 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 RAB12Q6IQ22 244 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 GLIPR1L1Q6UWM5 242 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 CDH26Q8IXH8 852 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 IZUMO1Q8IYV9 350 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 PRR18Q8N4B5 295 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 OR8H1Q8NGG4 311 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 OR4K15Q8NH41 348 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-202ENST00000337571 MUL1Q969V5 352 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 ORAI1Q96D31 301 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 ABCG5Q9H222 651 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 ETAA1Q9NY74 926 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 KCNIP1Q9NZI2 227 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 ZNF581Q9P0T4 197 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 CLEC2DQ9UHP7 191 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 PEX16Q9Y5Y5 336 aa8.41□□□□□ -1.06
CAPN3-202ENST00000337571 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-202ENST00000337571 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 TRBV5-5A0A0J9YX44 114 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 A0A1W2PP11 408 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 A0A1W2PPK0 400 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 LINC01548A6NM66 108 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 CCL24O00175 119 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 CA11O75493 328 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 CRTAPO75718 401 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-202ENST00000337571 MAS1P04201 325 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 VDAC1P21796 283 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 SOX6P35712 828 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 CAPGP40121 348 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 GPR12P47775 334 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 TAS2R43P59537 309 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 DGCR2P98153 550 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 ST3GAL4Q11206 333 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 GPR50Q13585 617 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 LRRC36Q1X8D7 754 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 STEAP3Q658P3 488 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 DMKNQ6E0U4 476 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-202ENST00000337571 DHRSXQ8N5I4 330 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 ZFP41Q8N8Y5 198 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 OR13C5Q8NGS8 318 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 S1PR3Q99500 378 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 SELENOIQ9C0D9 397 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 DCLRE1BQ9H816 532 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
CAPN3-202ENST00000337571 TRAV8-7A0A075B6U6 113 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 PNMA8CA0A1B0GUJ8 204 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 FAM90A10PA6NDY2 464 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 EFCAB10A6NFE3 127 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 FAM90A7PA6NKC0 464 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 FAM90A23PA8MXZ1 464 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms