RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RNF122Q9H9V4 155 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
RTN4-202ENST00000337526 ZNF785A8K8V0 405 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 TCL1AP56279 114 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 HES3Q5TGS1 186 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 DUSP15Q9H1R2 295 aaPredicted RBP11.97□□□□□ -0.49
RTN4-202ENST00000337526 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 IGKV1D-42A0A075B6H8 117 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 LRRC3CA6NJW4 275 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 PSG5Q15238 335 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 UBE2V2Q15819 145 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 SPNS3Q6ZMD2 512 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 ZBTB34Q8NCN2 500 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 CTXND1A0A1B0GTU2 59 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
RTN4-202ENST00000337526 IGSF11Q5DX21 431 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 CBY1Q9Y3M2 126 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 MFSD2BA6NFX1 497 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 MS4A18H0YCH9 400 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 J3QR89 54 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 CTSBP07858 339 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 HFEQ30201 348 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 MS4A18Q3C1V0 323 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 FBXW9Q5XUX1 488 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 PRSS3P2Q8NHM4 247 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 TLNRD1Q9H1K6 362 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 SRD5A3Q9H8P0 318 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 R4GN57 208 aa11.97□□□□□ -0.49
RTN4-202ENST00000337526 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 TMPRSS2O15393 492 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 HTR1DP28221 377 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 C19orf48Q6RUI8 117 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 CYB561D1Q8N8Q1 229 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 AQP3Q92482 292 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 PATE3B3GLJ2 98 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 DEDDO75618 318 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 OR2A4O95047 310 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 CEBPEQ15744 281 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 H1FOOQ8IZA3 346 aaPredicted RBP11.96□□□□□ -0.49
RTN4-202ENST00000337526 ADIPOR1Q96A54 375 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 OR2A7Q96R45 310 aa11.96□□□□□ -0.49
RTN4-202ENST00000337526 MDC1Q14676 2089 aaKnown RBP11.96□□□□□ -0.5
RTN4-202ENST00000337526 B2MP61769 119 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 SERF2P84101 59 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 GAMTQ14353 236 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 NHLRC2Q8NBF2 726 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 PITPNC1Q9UKF7 332 aa11.96□□□□□ -0.5
RTN4-202ENST00000337526 PTBP3O95758 552 aaKnown RBP11.95□□□□□ -0.5
RTN4-202ENST00000337526 THY1P04216 161 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 SP1P08047 785 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 AESQ08117 197 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 OR10C1Q96KK4 312 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 IER2Q9BTL4 223 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 OR2J1Q9GZK6 312 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 AURKAIP1Q9NWT8 199 aaPredicted RBP11.95□□□□□ -0.5
RTN4-202ENST00000337526 LHFPL6Q9Y693 200 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 KLF4O43474 513 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 OR2J3O76001 311 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 FAM157CP0CG43 387 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 PGA5P0DJD9 388 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 Q56UQ5 140 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 SLC25A47Q6Q0C1 308 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 TGIF2LXQ8IUE1 241 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 DEFB124Q8NES8 71 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 PITX3O75364 302 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
RTN4-202ENST00000337526 COX7A1P24310 79 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 TRIP6Q15654 476 aaKnown RBP11.95□□□□□ -0.5
RTN4-202ENST00000337526 OR4C5Q8NGB2 326 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 WNT2BQ93097 391 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 CBY3A6NI87 242 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 C21orf140B9A014 251 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 TMEM255AQ5JRV8 349 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 DCAF10Q5QP82 559 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 MOGAT3Q86VF5 341 aa11.95□□□□□ -0.5
RTN4-202ENST00000337526 M0R143 59 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 CELA2AP08217 269 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 ANKRD55Q3KP44 614 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 COX19Q49B96 90 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 ZNF362Q5T0B9 420 aaPredicted RBP11.94□□□□□ -0.5
RTN4-202ENST00000337526 BCL2P10415 239 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 NHLH1Q02575 133 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 GTF2H5Q6ZYL4 71 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 LINC00596Q86U02 117 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
RTN4-202ENST00000337526 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms