RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 OR52L2PQ8NGH6 319 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 MRGPRDQ8TDS7 321 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GALNT14Q96FL9 552 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 IP6K3Q96PC2 410 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 SUCNR1Q9BXA5 334 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 PCDHB16Q9NRJ7 776 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 RCC2Q9P258 522 aaKnown RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 CHD8Q9HCK8 2581 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 TXNL1O43396 289 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 CHST1O43916 411 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 SFTA3P0C7M3 94 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 SSTR5P35346 364 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 CEACAM6P40199 344 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 OR3A1P47881 315 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 Q6P435 159 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 ZFP82Q8N141 532 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 RTL8AQ9BWD3 113 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 A0A1B0GW55 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 E5RGE8 158 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 J3QT63 122 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 KLK10O43240 276 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L2P0CJ85 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L3P0CJ86 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L4P0CJ87 422 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L5P0CJ88 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L6P0CJ89 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4L7P0CJ90 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 GABRA2P47869 451 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 CAMLGP49069 296 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 TGFBR3Q03167 851 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 ZNF816Q0VGE8 651 aaPredicted RBP7.48□□□□□ -1.21
SNCA-201ENST00000336904 OR5C1Q8NGR4 320 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 TECTBQ96PL2 329 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 TMEM100Q9NV29 134 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 UQCC1Q9NVA1 299 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 DUX4Q9UBX2 424 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 NSG2Q9Y328 171 aa7.48□□□□□ -1.21
SNCA-201ENST00000336904 RAMP3O60896 148 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 PTBP3O95758 552 aaKnown RBP7.47□□□□□ -1.21
SNCA-201ENST00000336904 FBP1P09467 338 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 COX5BP10606 129 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 SELLP14151 372 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 ECI1P42126 302 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 DYNLT3P51808 116 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 HLA-DRB3P79483 266 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 UTF1Q5T230 341 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 ZNF324BQ6AW86 544 aaPredicted RBP7.47□□□□□ -1.21
SNCA-201ENST00000336904 WDR31Q8NA23 367 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 OR2Z1Q8NG97 314 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 OR4D5Q8NGN0 318 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
SNCA-201ENST00000336904 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 M0R1B8 84 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 IGKV1-39P01597 117 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 IGKV1D-39P04432 117 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 SERPINE2P07093 398 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 GLIPR1P48060 266 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 KCNJ3P48549 501 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 VAMP2P63027 116 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 CCL20P78556 96 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 PJVKQ0ZLH3 352 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 IL24Q13007 206 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 MPV17LQ2QL34 196 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 Q6ZT83 130 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 SEM1Q6ZVN7 128 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 OR2C3Q8N628 320 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 C2CD4CQ8TF44 421 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 LEAP2Q969E1 77 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 BOD1Q96IK1 185 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 RARRES2Q99969 163 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 TAAR3PQ9P1P4 343 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 DKK4Q9UBT3 224 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 CACNG5Q9UF02 275 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 OR2W1Q9Y3N9 320 aa7.47□□□□□ -1.21
SNCA-201ENST00000336904 KIR2DS1A0A191URI9 304 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 OR5B21A6NL26 309 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 RNASEK-C17orf49H0YIS7 233 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 HAND1O96004 215 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 IGLV2-14P01704 120 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 KIR2DS4P43632 304 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 KIR2DS1Q14954 304 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 TESK1Q15569 626 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 TGIF2LYQ8IUE0 185 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 ODF3L1Q8IXM7 274 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 CCDC36Q8IYA8 594 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 CMTM1Q8IZ96 169 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 EIF4E3Q8N5X7 224 aaKnown RBP7.46□□□□□ -1.21
SNCA-201ENST00000336904 GPR146Q96CH1 333 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 ABHD14BQ96IU4 210 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 NRIP2Q9BQI9 281 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 MMP26Q9NRE1 261 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 ATPIF1Q9UII2 106 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 COL6A6A6NMZ7 2263 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 PTPRBP23467 1997 aa7.46□□□□□ -1.21
SNCA-201ENST00000336904 A0A1W2PPE3 182 aa7.46□□□□□ -1.22
SNCA-201ENST00000336904 TRIM77I1YAP6 450 aa7.46□□□□□ -1.22
SNCA-201ENST00000336904 CDK2AP1O14519 115 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms