RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KIR2DS1A0A191URI9 304 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 A0A1W2PR64 198 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 C7orf77A4D0Y5 90 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 TUSC2O75896 110 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 SERPINE2P07093 398 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 KIR2DS4P43632 304 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 KIR2DS1Q14954 304 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 ZNF573Q86YE8 665 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 SCRT1Q9BWW7 348 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 UFSP2Q9NUQ7 469 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 COLCA2A8K830 154 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 SOX8P57073 446 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
UBA1-201ENST00000335972 SCCPDHQ8NBX0 429 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 OR2H2O95918 312 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 RAB13P51153 203 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 MPV17LQ2QL34 196 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 Q8NFD4 153 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 TRIB1Q96RU8 372 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 OR51I2Q9H344 312 aa12.6□□□□□ -0.39
UBA1-201ENST00000335972 NXPH2O95156 264 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 ZNF324BQ6AW86 544 aaPredicted RBP12.59□□□□□ -0.39
UBA1-201ENST00000335972 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
UBA1-201ENST00000335972 F2RP25116 425 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 LINC00205P59089 165 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 ZNF808Q8N4W9 903 aaPredicted RBP12.59□□□□□ -0.39
UBA1-201ENST00000335972 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 OR2W1Q9Y3N9 320 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 ZFHX2Q9C0A1 2572 aaPredicted RBP12.59□□□□□ -0.39
UBA1-201ENST00000335972 KMT2EQ8IZD2 1858 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 VDAC1P21796 283 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 MPV17P39210 176 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
UBA1-201ENST00000335972 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
UBA1-201ENST00000335972 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 UCP1P25874 307 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 HLA-DRB3P79483 266 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 LINC00518Q8N0U6 118 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 FAM24BQ8N5W8 94 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 OR1J1Q8NGS3 322 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 RBMXL1Q96E39 390 aaKnown RBP12.58□□□□□ -0.4
UBA1-201ENST00000335972 C11orf1Q9H5F2 150 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 LYRM2Q9NU23 88 aaPredicted RBP12.58□□□□□ -0.4
UBA1-201ENST00000335972 K7N7A8 449 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 PAX9P55771 341 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 UBE2NP61088 152 aaKnown RBP12.58□□□□□ -0.4
UBA1-201ENST00000335972 PPP1CBP62140 327 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 SNRPEP62304 92 aaKnown RBP12.58□□□□□ -0.4
UBA1-201ENST00000335972 LTC4SQ16873 150 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 FER1L6-AS2Q96M78 137 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 RSG1Q9BU20 258 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 CDH20Q9HBT6 801 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 KCNJ16Q9NPI9 418 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 SPAARA0A1B0GVQ0 90 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 ZNF727A8MUV8 499 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 COX5BP10606 129 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 OR2B8PP59922 312 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 Q6P435 159 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 LYPD6BQ8NI32 183 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 OBP2BQ9NPH6 170 aa12.58□□□□□ -0.4
UBA1-201ENST00000335972 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 TBC1D28Q2M2D7 210 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SAXO1Q8IYX7 474 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SMCO4Q9NRQ5 59 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 ATPIF1Q9UII2 106 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 KPTNQ9Y664 436 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 PIEZO2Q9H5I5 2752 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A18PA6NE21 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A16PA6NEW6 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A20PA6NIJ5 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A8PA6NJQ4 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A7PA6NKC0 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A22PA8MWA6 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A12PA8MX19 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A5PA8MXJ8 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A23PA8MXZ1 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A15PP0C7V4 464 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms